Table 2. Apoflavodoxin/FMN binding energetics.
Parameter | Protein | |||
---|---|---|---|---|
H. pyloria | Anabaena WTb | Anabaena W57Ac | ||
pH 7 | pH 9 | pH 7 | pH 7 | |
ITC | ||||
Kd (nM) | 27 ± 1 | 23 ± 2 | - | - |
ΔG (kcal/mol) | -10.3 ± 0.1 | -10.3 ± 0.1 | - | - |
ΔH (kcal/mol) | -21 ± 0.3 | -25 ± 0.2 | -11.8 ± 0.3 | -7.1 ± 0.2 |
ΔS (cal.mol-1.K-1) | -36 ± 1 | -49 ± 0.7 | - | - |
ΔCP (cal.mol-1.K-1) | -600d ± 30 | - | -600 ± 20 | -620 ± 50 |
Spectroscopy | ||||
Kd (nM) | 4.4 ± 0.7 | - | 0.26 ± 0.06 | 5.2 ± 0.9 (11.4) |
ΔG (kcal/mol) | -11.4 ± 0.5 | - | -13.1 ± 0.1 | -11.3 ± 0.1 (-10.8) |
ΔHe (kcal/mol) | -14 ± 2 | - | - | - |
ΔS (cal.mol-1.K-1) | -7.7 ± 6 | - | 8f ± 2 | 14f ± 1 |
At 25 °C, in MOPS 50 mM, pH 7.0 or EPPS 50 mM, pH 9.0. The errors reported in this Table were provided by the fitting program and propagated when required.
At 25 °C in MOPS 50 mM, pH 7.0(ref. 7). ΔH and ΔS values were measured in 50 mM phosphate, pH 7.0.
At 25 °C in 50 mM phosphate, pH 7.0 (ref. 7). Values in parenthesis were obtained in 50 mM MOPS, pH 7.0.
Calculated as the slope of ΔH vs T at 10, 15, 20 and 25 °C.
Calculated from spectroscopic titrations at 11, 15 and 20 °C (Kd = 2.1, 3.4 and 4.4 nM, respectively).
ΔS in this case was calculated from the ΔG value spectroscopically determined and the calorimetrically measured ΔH value.