Table 2. Number of binding/non-binding peptides in MHCBN benchmark dataset.
Allele | UPDS | SRDS1 | SRDS2 | SRDS3 |
HLA-DR1 | 636/180 | 328/111 | 223/106 | 259/130 |
HLA-DR2 | 416/168 | 197/124 | 153/123 | 232/149 |
HLA-DR5 | 218/173 | 111/131 | 80/129 | 100/154 |
HLA-DRB10101 | 531/127 | 325/88 | 279/76 | 390/112 |
HLA-DRB10301 | 261/230 | 137/150 | 127/145 | 175/215 |
HLA-DRB10401 | 805/201 | 471/136 | 404/119 | 543/174 |
HLA-DRB10701 | 292/107 | 179/68 | 152/66 | 213/92 |
HLA-DRB11101 | 352/137 | 213/87 | 182/87 | 239/131 |
UPDS refers to datasets of non-redundant peptides. The last three columns refer to similarity-reduced datasets (see text for details).