Table 7. AUC values for the three methods evaluated on MHCPEP-SRDS1 datasets.
Allele | 5-spectrum | LA | CTD |
HLA-DQ2 | 0.789(3) | 0.852(2) | 0.853(1) |
HLA-DQ4 | 0.544(3) | 0.854(2) | 0.881(1) |
HLA-DQ7 | 0.677(3) | 0.799(1) | 0.726(2) |
HLA-DR1 | 0.662(3) | 0.801(1) | 0.744(2) |
HLA-DR2 | 0.694(3) | 0.795(1) | 0.781(2) |
HLA-DR3 | 0.603(2) | 0.678(1) | 0.572(3) |
HLA-DR4 | 0.710(3) | 0.751(1) | 0.723(2) |
HLA-DR5 | 0.691(3) | 0.776(2) | 0.784(1) |
HLA-DR7 | 0.721(2) | 0.702(3) | 0.732(1) |
HLA-DR8 | 0.552(3) | 0.625(2) | 0.694(1) |
HLA-DR9 | 0.620(3) | 0.746(1) | 0.721(2) |
HLA-DR11 | 0.703(3) | 0.912(1) | 0.890(2) |
HLA-DR13 | 0.746(3) | 0.827(2) | 0.837(1) |
HLA-DR15 | 0.711(2) | 0.718(1) | 0.667(3) |
HLA-DR17 | 0.789(3) | 0.806(2) | 0.876(1) |
HLA-DR51 | 0.651(2) | 0.788(1) | 0.603(3) |
I-Ab | 0.620(3) | 0.705(1) | 0.680(2) |
I-Ad | 0.787(3) | 0.818(1) | 0.804(2) |
I-Ag7 | 0.718(2) | 0.778(1) | 0.702(3) |
I-Ak | 0.761(3) | 0.800(1) | 0.796(2) |
I-Ed | 0.826(3) | 0.903(2) | 0.932(1) |
I-Ek | 0.874(3) | 0.913(2) | 0.941(1) |
Average | 0.702(2.77) | 0.789(1.45) | 0.770(1.77) |
For each dataset, the rank of each classifier is shown in parentheses.