Table 8. AUC values for the three methods evaluated on MHCPEP-SRDS2 datasets.
Allele | 5-spectrum | LA | CTD |
HLA-DQ2 | 0.566(3) | 0.678(1) | 0.573(2) |
HLA-DQ4 | 0.590(3) | 0.954(1) | 0.817(2) |
HLA-DQ7 | 0.616(3) | 0.713(1) | 0.709(2) |
HLA-DR1 | 0.562(3) | 0.715(1) | 0.711(2) |
HLA-DR2 | 0.548(3) | 0.633(1) | 0.614(2) |
HLA-DR3 | 0.514(3) | 0.602(1) | 0.572(2) |
HLA-DR4 | 0.578(3) | 0.711(1) | 0.692(2) |
HLA-DR5 | 0.583(3) | 0.622(2) | 0.625(1) |
HLA-DR7 | 0.562(3) | 0.622(1) | 0.599(2) |
HLA-DR8 | 0.526(3) | 0.717(1) | 0.680(2) |
HLA-DR9 | 0.488(3) | 0.754(1) | 0.690(2) |
HLA-DR11 | 0.528(3) | 0.810(1) | 0.792(2) |
HLA-DR13 | 0.518(3) | 0.827(1) | 0.587(2) |
HLA-DR15 | 0.592(3) | 0.698(1) | 0.689(2) |
HLA-DR17 | 0.568(2) | 0.612(1) | 0.550(3) |
HLA-DR51 | 0.578(3) | 0.664(1) | 0.595(2) |
I-Ab | 0.570(3) | 0.624(2) | 0.638(1) |
I-Ad | 0.623(2) | 0.700(1) | 0.618(3) |
I-Ag7 | 0.713(2) | 0.756(1) | 0.632(3) |
I-Ak | 0.586(3) | 0.664(1) | 0.661(2) |
I-Ed | 0.645(3) | 0.760(1) | 0.744(2) |
I-Ek | 0.606(3) | 0.756(1) | 0.703(2) |
Average | 0.575(2.86) | 0.709(1.09) | 0.659(2.05) |
For each dataset, the rank of each classifier is shown in parentheses.