Table 9. AUC values for the three methods evaluated on MHCPEP-SRDS3 datasets.
Allele | 5-spectrum | LA | CTD |
HLA-DQ2 | 0.663(2) | 0.655(3) | 0.754(1) |
HLA-DQ4 | 0.608(3) | 0.900(1) | 0.900(1) |
HLA-DQ7 | 0.699(3) | 0.757(1) | 0.706(2) |
HLA-DR1 | 0.676(3) | 0.747(1) | 0.720(2) |
HLA-DR2 | 0.724(2) | 0.736(1) | 0.686(3) |
HLA-DR3 | 0.623(2) | 0.657(1) | 0.532(3) |
HLA-DR4 | 0.679(3) | 0.717(1) | 0.695(2) |
HLA-DR5 | 0.719(2) | 0.723(1) | 0.617(3) |
HLA-DR7 | 0.631(2) | 0.765(1) | 0.613(3) |
HLA-DR8 | 0.608(3) | 0.732(1) | 0.714(2) |
HLA-DR9 | 0.520(3) | 0.779(2) | 0.792(1) |
HLA-DR11 | 0.544(3) | 0.854(1) | 0.850(2) |
HLA-DR13 | 0.563(3) | 0.623(2) | 0.630(1) |
HLA-DR15 | 0.805(1) | 0.713(2) | 0.663(3) |
HLA-DR17 | 0.629(3) | 0.769(1) | 0.682(2) |
HLA-DR51 | 0.800(1) | 0.780(2) | 0.672(3) |
I-Ab | 0.606(3) | 0.611(2) | 0.618(1) |
I-Ad | 0.821(1) | 0.785(2) | 0.676(3) |
I-Ag7 | 0.823(1) | 0.804(2) | 0.757(3) |
I-Ak | 0.768(1) | 0.766(2) | 0.691(3) |
I-Ed | 0.828(2) | 0.852(1) | 0.787(3) |
I-Ek | 0.714(2) | 0.789(1) | 0.699(3) |
Average | 0.684(2.23) | 0.751(1.45) | 0.702(2.27) |
For each dataset, the rank of each classifier is shown in parentheses.