Table 6.

Transcription factors preferently associated to DNR-inhibited genes

Factor	Total regulated genesa)	DNR-down regulated genes			p
		Observed	Expected (out of 280)	Observed/Expected	Hypergeometric	Bonferroni
Sok2p	561	118	45.45	2.6	5.6 × 10-27	7.2 × 10-25
Msn2p	316	72	25.58	2.8	2.0 × 10-17	2.6 × 10-15
Msn4p	286	67	23.13	2.9	8.3 × 10-17	1.1 × 10-14
Gis1p	91	35	7.35	4.8	1.5 × 10-16	1.9 × 10-14
Cst6p	104	36	8.44	4.3	4.0 × 10-15	5.1 × 10-13
Pdr3p	84	29	6.8	4.3	2.4 × 10-12	3.1 × 10-10
Yap1p	1025	133	83	1.6	2.1 × 10-11	2.8 × 10-9
Met4p	746	105	60.42	1.7	8.8 × 10-11	1.1 × 10-8
Adr1p	148	36	11.97	3.0	3.6 × 10-10	4.6 × 10-8
Xbp1p	84	26	6.8	3.8	5.3 × 10-10	6.9 × 10-8
Rox1p	202	44	16.33	2.7	6.2 × 10-10	7.9 × 10-8
Aft1p	397	66	32.11	2.1	9.5 × 10-10	1.2 × 10-7
Crz1p	155	37	12.52	3.0	1.4 × 10-9	1.8 × 10-7
Pdr1p	205	42	16.6	2.5	3.9 × 10-9	5.1 × 10-7
Skn7p	215	44	17.42	2.5	5.4 × 10-9	7.0 × 10-7
Gcn4p	309	54	25.04	2.2	7.8 × 10-9	1.0 × 10-6
Stp2p	131	32	10.61	3.0	1.5 × 10-8	2.0 × 10-6
Hsf1p	266	48	21.5	2.2	5.2 × 10-8	6.7 × 10-6
Mig1p	74	21	5.99	3.5	1.1 × 10-7	1.4 × 10-5
Ino2p	81	22	6.53	3.4	1.2 × 10-7	1.6 × 10-5
Gcr2p	97	25	7.89	3.2	2.8 × 10-7	3.6 × 10-5
Mga1p	151	31	12.25	2.5	4.6 × 10-7	5.9 × 10-5
Mbp1p	242	42	19.59	2.1	4.6 × 10-7	5.9 × 10-5
Rfx1p	87	23	7.08	3.2	6.0 × 10-7	7.7 × 10-5
Stp1p	91	23	7.35	3.1	1.1 × 10-6	1.4 × 10-4
Rtg3p	108	24	8.71	2.8	1.9 × 10-6	2.4 × 10-4
Swi4p	302	47	24.49	1.9	2.5 × 10-6	3.3 × 10-4
Rgt1p	44	14	3.54	4.0	2.9 × 10-6	3.7 × 10-4
Ino4p	333	50	26.94	1.9	3.1 × 10-6	4.0 × 10-4
Sut1p	34	12	2.72	4.4	4.1 × 10-6	5.3 × 10-4
Gat4p	64	18	5.17	3.5	4.5 × 10-6	5.8 × 10-4
Nrg1p	168	31	13.61	2.3	4.7 × 10-6	6.1 × 10-4

a) Number of genes associated to each factor, following YEASTRACT. Only genes used in the microarray analysis (3458) were considered.