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. 2008 Jul 30;9:358. doi: 10.1186/1471-2164-9-358

Table 9.

Genes and conditions used for the graph in Figure 6.

Gly genes rpg genes rpg genes Experiments/conditions
ADH1 RPL10 RPL6A DNA damagea Osmotic stressb Oxidative stressb
ADH2 RPL11A RPL6B DES460 + 0.02% MMS - 120 min 1M sorbitol - 120 min 1 mM Menadione (10 min)redo
ADH3 RPL11B RPL7A DES460 + 0.02% MMS - 15 min 1M sorbitol - 15 min 1 mM Menadione (105 min) redo
ADH5 RPL12A RPL7B DES460 + 0.02% MMS - 30 min 1M sorbitol - 30 min 1 mM Menadione (120 min)redo
CDC19 RPL12B RPL8A DES460 + 0.02% MMS - 5 min 1M sorbitol - 45 min 1 mM Menadione (160 min) redo
ENO1 RPL13A RPL8B DES460 + 0.02% MMS - 60 min 1M sorbitol - 5 min 1 mM Menadione (20 min) redo
ENO2 RPL13B RPL9A DES460 + 0.02% MMS - 90 min 1M sorbitol - 60 min 1 mM Menadione (30 min) redo
FBA1 RPL14B RPL9B DES460 + 0.2% MMS - 45 min 1M sorbitol - 90 min 1 mM Menadione (50 min)redo
GLK1 RPL15B RPS0A wt_plus_gamma_10_min Hypo-osmotic shock - 15 min 1 mM Menadione (80 min) redo
GPM1 RPL16A RPS0B wt_plus_gamma_120_min Hypo-osmotic shock - 30 min 1.5 mM diamide (10 min)
GPM2 RPL16B RPS10A wt_plus_gamma_20_min Hypo-osmotic shock - 45 min 1.5 mM diamide (20 min)
GPM3 RPL17A RPS10B wt_plus_gamma_30_min Hypo-osmotic shock - 5 min 1.5 mM diamide (30 min)
HXK1 RPL17B RPS11A wt_plus_gamma_45_min Hypo-osmotic shock - 60 min 1.5 mM diamide (40 min)
HXK2 RPL18A RPS11B wt_plus_gamma_5_min 1.5 mM diamide (5 min)
LAT1 RPL18B RPS12 wt_plus_gamma_60_min AA/N starvationb 1.5 mM diamide (50 min)
PDA1 RPL19A RPS13 wt_plus_gamma_90_min aa starv 0.5 h 1.5 mM diamide (60 min)
PDB1 RPL19B RPS14A aa starv 1 h 1.5 mM diamide (90 min)
PDC1 RPL1A RPS14B aa starv 2 h 1 mM Menadione (40 min) redo
PDC5 RPL1B RPS15 Temperatureb aa starv 4 h 2.5 mM DTT 005 min dtt-1
PDX1 RPL20A RPS16A 17 deg growth ct-1 aa starv 6 h 2.5 mM DTT 015 min dtt-1
PFK1 RPL20B RPS16B 21 deg growth ct-1 Nitrogen Depletion 1 d 2.5 mM DTT 030 min dtt-1
PFK2 RPL21A RPS17A 25 deg growth ct-1 Nitrogen Depletion 1 h 2.5 mM DTT 045 min dtt-1
PGI1 RPL21B RPS17B 29 deg growth ct-1 Nitrogen Depletion 12 h 2.5 mM DTT 060 min dtt-1
PGK1 RPL22A RPS18A 29C to 33C - 15 minutes Nitrogen Depletion 2 d 2.5 mM DTT 090 min dtt-1
PGM1 RPL22B RPS18B 29C to 33C - 30 minutes Nitrogen Depletion 2 h 2.5 mM DTT 120 min dtt-1
PGM2 RPL23A RPS19A 29C to 33C - 5 minutes Nitrogen Depletion 3 d 2.5 mM DTT 180 min dtt-1
STO1 RPL23B RPS19B 33C vs. 30C - 90 minutes Nitrogen Depletion 30 min. constant 0.32 mM H2O2 (10 min) redo
TDH1 RPL24A RPS1A 37 deg growth ct-1 Nitrogen Depletion 4 h constant 0.32 mM H2O2 (100 min) redo
TDH2 RPL24B RPS1B DBY7286 37 degree heat - 20 min Nitrogen Depletion 5 d constant 0.32 mM H2O2 (120 min) redo
TDH3 RPL25 RPS2 DBYmsn2/4 (real strain) + 37 degrees (20 min) Nitrogen Depletion 8 h constant 0.32 mM H2O2 (160 min) redo
TPI1 RPL26A RPS20 DBYmsn2-4- 37 degree heat - 20 min constant 0.32 mM H2O2 (20 min) redo
TYE7 RPL26B RPS21A Heat Shock 005 minutes hs-2 Stationary phaseb constant 0.32 mM H2O2 (30 min) redo
RPL27A RPS22A Heat Shock 015 minutes hs-2 YPD 1 d ypd-2 constant 0.32 mM H2O2 (40 min) rescan
RPL27B RPS22B Heat Shock 030inutes hs-2 YPD 10 h ypd-2 constant 0.32 mM H2O2 (50 min) redo
RPL28 RPS23A Heat Shock 05 minutes hs-1 YPD 12 h ypd-2 constant 0.32 mM H2O2 (60 min) redo
RPL2A RPS23B Heat Shock 060 minutes hs-2 YPD 2 d ypd-2 constant 0.32 mM H2O2 (80 min) redo
RPL3 RPS24A Heat Shock 10 minutes hs-1 YPD 2 h ypd-2 DBY7286 + 0.3 mM H2O2 (20 min)
RPL30 RPS24B Heat Shock 15 minutes hs-1 YPD 3 d ypd-2 DBYmsn2/4 (real strain) + 0.32 mM H2O2 (20 min)
RPL31A RPS25A heat shock 17 to 37, 20 minutes YPD 4 h ypd-2 DBYmsn2msn4 (good strain) + 0.32 mM H2O2
RPL31B RPS25B Heat Shock 20 minutes hs-1 YPD 5 d ypd-2 dtt 000 min dtt-2
RPL32 RPS26A heat shock 21 to 37, 20 minutes YPD 6 h ypd-2 dtt 015 min dtt-2
RPL33A RPS26B heat shock 25 to 37, 20 minutes YPD 8 h ypd-2 dtt 030 min dtt-2
RPL33B RPS27A heat shock 29 to 37, 20 minutes YPD stationary phase 1 d ypd-1 dtt 060 min dtt-2
RPL34B RPS27B Heat Shock 30 minutes hs-1 YPD stationary phase 12 h ypd-1 dtt 120 min dtt-2
RPL35A RPS28A heat shock 33 to 37, 20 minutes YPD stationary phase 13 d ypd-1 dtt 240 min dtt-2
RPL35B RPS28B Heat Shock 40 minutes hs-1 YPD stationary phase 2 d ypd-1 dtt 480 min dtt-2
RPL36A RPS29A Heat Shock 60 minutes hs-1 YPD stationary phase 2 h ypd-1
RPL37A RPS29B Heat Shock 80 minutes hs-1 YPD stationary phase 22 d ypd-1
RPL37B RPS3 steady state 15 dec C ct-2 YPD stationary phase 28 d ypd-1
RPL38 RPS30A steady state 17 dec C ct-2 YPD stationary phase 3 d ypd-1
RPL39 RPS30B steady state 21 dec C ct-2 YPD stationary phase 4 h ypd-1
RPL40A RPS31 steady state 25 dec C ct-2 YPD stationary phase 5 d ypd-1
RPL40B RPS4A steady state 29 dec C ct-2 YPD stationary phase 7 d ypd-1
RPL41A RPS4B steady state 33 dec C ct-2 YPD stationary phase 8 h ypd-1
RPL42A RPS6A steady state 36 dec C ct-2
RPL42B RPS6B steady state 36 dec C ct-2 (repeat hyb)
RPL43A RPS7A
RPL43B RPS7B
RPL4A RPS8A
RPL4B RPS8B
RPL5 RPS9A
RPS9B

a) Data from reference [21]

b) Data from reference [22]