Table 2.
mRNA levels sorted by level of induction, calculated as ratio (c/c oleate divided by c/c glucose)
| c/c wt ole | c/c wt glu | Ratio ole/glu | c/c pip2/oaf1 ole | Systematic name | Gene name | Description | |
|---|---|---|---|---|---|---|---|
| 1 | 117.2 | 0.0 | 473.8 | 8.3 | YIL160c | POT1 | Acetyl-CoA C-acyltransferase, peroxisomal |
| 2 | 92.6 | 0.0 | 374.3 | 220.0 | YCR010c | Strong similarity to Y. lipolytica GPR1 protein and Fun34p | |
| 3 | 76.7 | 0.0 | 310.0 | 16.6 | YDR256c | CTA1 | Catalase A, peroxisomal |
| 4 | 75.2 | 0.0 | 304.2 | 199.3 | YIL057c | Strong similarity to YER067w | |
| 5 | 117.2 | 0.5 | 236.9 | 91.3 | YOL126c | MDH2 | Malate dehydrogenase, cytoplasmic |
| 6 | 47.8 | 0.0 | 193.0 | 0.0 | YGL205w | POX1 | Acyl-CoA oxidase |
| 7 | 42.0 | 0.0 | 169.6 | 4.2 | YER065c | ICL1 | Isocitrate lyase |
| 8 | 37.6 | 0.0 | 152.1 | 37.4 | YOR348c | PUT4 | Proline and gamma-aminobutyrate permease |
| 9 | 36.2 | 0.0 | 146.2 | 0.0 | YOR084w | Hypothetical protein | |
| 10 | 34.7 | 0.2 | 140.4 | 45.7 | YIL136w | OM45 | Protein of the outer mitochondrial membrane |
| 11 | 31.8 | 0.0 | 128.7 | 4.2 | YFL030w | Similarity to several transaminases | |
| 12 | 28.9 | 0.2 | 117.0 | 124.6 | YOL052c-a | DDR2 | Heat shock protein DDRA2 |
| 13 | 28.9 | 0.2 | 117.0 | 41.5 | YAL054c | ACS1 | Acetyl-CoA synthetase |
| 14 | 28.9 | 0.2 | 117.0 | 20.8 | YIL155c | GUT2 | Glycerol-3-phosphate dehydrogenase, mitochondrial |
| 15 | 28.9 | 0.0 | 117.0 | 8.3 | YLR174w | IDP2 | Isocitrate dehydrogenase, cytosolic |
| 16 | 28.9 | 0.0 | 117.0 | 4.2 | YJR019c | TES1 | Thioesterase, peroxisomal |
| 17 | 27.5 | 0.2 | 111.1 | 166.1 | YKL217w | JEN1 | Carboxylic acid transporter protein |
| 18 | 26.0 | 0.2 | 105.3 | 20.8 | YKL187c | Strong similarity to hypothetical protein YLR413w | |
| 19 | 24.6 | 0.0 | 99.4 | 12.5 | YLR377c | FBP1 | Fructose-1,6-bisphosphatase |
| 20 | 23.2 | 0.0 | 93.6 | 4.2 | YER015w | FAA2 | Long-chain fatty acid–CoA ligase |
| 21 | 21.7 | 0.2 | 87.7 | 54.0 | YMR107w | Hypothetical protein | |
| 22 | 20.3 | 0.2 | 81.9 | 0.0 | YJL153c | INO1 | Myo-inositol-1-phosphate synthase |
| 23 | 20.3 | 0.0 | 81.9 | 0.0 | YNL009w | IDP3 | Isocitrate dehydrogenase, NADP-dependent |
| 24 | 20.3 | 0.0 | 81.9 | 16.6 | YNL117w | MLS1 | Malate synthase 1 |
| 25 | 97.0 | 1.2 | 78.4 | 174.4 | YOR374w | ALD7 | Aldehyde dehydrogenase |
| 26 | 37.6 | 0.5 | 76.0 | 4.2 | YNL202w | SPS19 | 2,4-Dienoyl-CoA reductase, peroxisomal |
| 27 | 18.8 | 0.0 | 76.0 | 4.2 | YIL125w | KGD1 | 2-Oxoglutarate dehydrogenase complex E1 component |
| 28 | 18.8 | 0.0 | 76.0 | 8.3 | YKR097w | PCK1 | Phosphoenolpyruvate carboxykinase |
| 29 | 17.4 | 0.0 | 70.2 | 0.0 | YOL155c | Similarity to glucan 1,4-alpha-glucosidase Sta1p and YAR066w | |
| 30 | 15.9 | 0.0 | 64.3 | 12.5 | YLR155c/157c/ 158c/160c | ASP3A/B/C/D | l-Asparaginase II |
| 31 | 15.9 | 0.0 | 64.3 | 4.2 | YGR244c | Strong similarity to rumen fungus beta-succinyl CoA synthetase | |
| 32 | 121.6 | 2.0 | 61.4 | 311.4 | YFL014w | HSP12 | Heat shock protein |
| 33 | 14.5 | 0.2 | 58.5 | 37.4 | YDR070c | Hypothetical protein | |
| 34 | 14.5 | 0.0 | 58.5 | 12.5 | YBR046c | ZTA1 | Similarity to ζ-crystallin |
| 35 | 13.0 | 0.2 | 52.6 | 0.0 | YCR062w | Similarity to Ytp1p protein |
Genes encoding peroxisomal proteins are shown in bold type. For calculation of ratios, a tag value of 1 (corresponding to 0.25 c/c) was used to avoid division by zero. wt, wild-type; ole, oleate; glu, glucose.