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. Author manuscript; available in PMC: 2008 Dec 13.
Published in final edited form as: J Phys Chem B. 2007 Nov 16;111(49):13797–13806. doi: 10.1021/jp075051y

Table 2.

RMSD (nm) comparisons among average structures (upper-right triangle) and representative snapshots (lower-left triangle) of dominant conformers. The C-terminal oxygen atom(s) of the peptide are excluded in RMSD calculation.

A1 B1 C1 D1 E1 A2 B2 C2 D2 E2
A1 --- 0.09 0.09 0.09 0.05 0.32 0.37 0.30 0.34 0.31
B1 0.15 --- 0.08 0.08 0.07 0.30 0.37 0.28 0.32 0.29
C1 0.16 0.15 --- 0.08 0.08 0.31 0.37 0.29 0.33 0.30
D1 0.17 0.12 0.15 --- 0.07 0.33 0.39 0.31 0.35 0.32
E1 0.10 0.13 0.14 0.15 --- 0.30 0.36 0.28 0.32 0.30
A2 0.36 0.40 0.38 0.42 0.38 --- 0.19 0.07 0.06 0.05
B2 0.39 0.43 0.41 0.44 0.41 0.23 --- 0.19 0.17 0.20
C2 0.36 0.38 0.38 0.40 0.37 0.17 0.27 --- 0.09 0.08
D2 0.34 0.38 0.37 0.40 0.36 0.11 0.20 0.18 --- 0.06
E2 0.36 0.39 0.38 0.41 0.37 0.10 0.23 0.15 0.11 ---