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. 2008 Sep 10;6:41. doi: 10.1186/1477-7827-6-41

Table 2.

qRT-PCR confirmation of differential expression of selected transcriptsa

4S vs. 2AS (fold) 9S vs. 3AS (fold)
Gene Symbol qRT-PCR Microarray qRT-PCR Microarray

Up-regulated

BCAR3 3.907 2.488 1.171 2.611
CLIC4 31.636 21.46 24.750 11.710
COL4A1 3.387 3.584 1.768 2.179
COL4A2 2.967 7.692 1.834 2.725
CXCR4 5.000 2.762 13.037 3.876
KLF4 4.532 2.110 1.816 3.185
LAMC2 1.633 3.003 2.276 3.676
LAPTM5 22.135 24.331 37.060 5.917
MAPKAPK3 3.665 3.861 7.056 3.831
NR3C1 7.111 2.841 12.500 4.386
PSAT1 1.394 2.278 2.876 6.897
PTCH1 3.572 4.310 3.008 2.242
RXRα 10.953 5.405 5.750 2.445
SLPI 26.636 9.524 4.788 11.779

Down-regulated

ALDHIAI 0.222 0.174 0.109 0.068
AKR7A2 0.647 0.491 0.264 0.387
C1orf186 0.366 0.155 0.278 0.265
FZD5 0.365 0.440 0.552 0.380
PAX2 0.145 0.247 0.041 0.382
RAB25 0.012 0.076 0.002 0.082

aAll fold change values were statistically significant (P < 0.05); n = 2 replicates per cell line.

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