TABLE 1.
Oligodeoxynucleotides used in this study
| Oligodeoxynucleotide | Sequence (5′-3′) | Positions relative to the translation start of the corresponding gene |
|---|---|---|
| RD1 | GGAGCATGAGGATCCCGGCATGAACCAG | −19 to +9 (rpoD) |
| RD2 | CCTACATTTCTGGGGCATTC | +1318 to +1299 (rpoD) |
| RA1 | AAGGGAGGCGGATCCGTGGCGCAGTTTC | −15 to +13 (rpoA) |
| RA2 | GACCATGACGGATTAGCTCAG | +1080 to +1060 (rpoA) |
| RB5 | CGGCTAATGACACCCATGGTAGTGTCATC | −21 to +8 (rpoB) |
| RB2 | GGGATGAGACTGGCTGAATATG | +500 to +479 (rpoB) |
| RB3 | GTGCGATCGCCTGGAGTTTATTAC | +424 to +447 (rpoB) |
| RB7 | CATCTTGTACCAGTCGTTCGG | +2134 to +2114 (rpoB) |
| RB6 | GTAGTTGCTGGTCAGGTGC | +1987 to +2005 (rpoB) |
| RB4 | GTGCTGAGTTCTGAGTAAAG | +3524 to +3505 (rpoB) |
| RC110 | CATTAGTGAATAGTCCCGGGTT | +1939 to +1918 (rpoC1) |
| RC111 | CAGCCCATGGGTATGAGACCCGCCCAAAC | −12 to +17 (rpoC1) |
| RC25 | GACTAACGAATTCATGATTTTTCGC | −13 to +12 (rpoC2) |
| RC26 | GTTTCGACGGGATCCCCATTTTTC | +1517 to +1494 (rpoC2) |
| RC27 | GCCAGAGGTGGTTTGATTTG | +1422 to +1437 (rpoC2) |
| RC28 | GATGTCACGACGCAAAACTAAGG | +2532 to +2510 (rpoC2) |
| RC29 | GACCTGACCTTGAGGATGCAG | +2461 to +2476 (rpoC2) |
| RC210 | GATATAGGATGTTGTCGACGTTGTG | +4173 to +4249 (rpoC2) |
| DB1 | CCCCCTACTCCCTTTCC | −825 to −809 (devB) |
| DB3 | CCTGCTTCTTCTGGTCAGCG | −807 to −788 (devB) |
| DB4 | CATAACATTTCCCCAAGTC | −580 to −598 (devB) |
| DB13 | TCCGTCACCCTTGACAT | −3 to +17 (devB) |
| HC1 | TAGTACATCGGTGAGGGGTG | −693 to −674 (hetC) |
| HC2 | TGTGAGCAACATCGACATCTG | −411 to −431 (hetC) |
| PA1 | CAGAGCAGCCGATTGTCTGTTG | +97 to +76 (psbA) |
| PA2 | CTGATAAGTGAGCTATTCAC | −145 to −126 (psbA) |
| NA1 | CTGGCGGCTTGATGCACACGG | +104 to +84 (nrrA) |
| NA2 | ATTCAGGCTGAAATGTGAAGGG | −498 to −477 (nrrA) |
| NA14 | CGTAGAGGTAATTGTGGC | −96 to −79 (nrrA) |