Table A.4.
Sensitivity of CD8+ T cell output to full model parameters by PRC analysis
Parameter | 1 day | 2 days | 3 days | 4 days | 5 days | 6 days | 7 days |
---|---|---|---|---|---|---|---|
CD4+ T cells | |||||||
recruitment | ↓ | ↓↓ | ↓↓↓ | ↓↓↓ | |||
doubling time | ↓↓ | ↓↓ | ↓↓↓ | ↓↓↓ | ↓↓↓ | ||
number of divisions | ↓↓ | ↓↓ | ↓ | ↓ | ↓ | ||
Antigen-bearing DC activation | ↑ | ↑↑↑ | ↑↑ | ↑↑ | |||
CD8+ T cells | |||||||
cognate binding to LDC | ↑ | ↑ | ↑ | ||||
LDC activation | ↑ | ↑ | ↑ | ||||
Primed CD4 binds DC | ↑ | ||||||
Primed T cell matures DC | ↑ | ↑ | ↑ | ||||
Short-term persistence | |||||||
CD4+ T cell chemotaxis | |||||||
strength | |||||||
duration | ↓ | ↓ | ↓ | ↓ | |||
recovery | ↑ | ||||||
CD8+ T cell chemotaxis | |||||||
strength | |||||||
duration | |||||||
recovery |
Cognate: non-cognate ratio = 1:300
ns = p > 0.000358 (threshold based on Bonferroni correction)
↓ or ↑ = p < 0.000358, with negative or positive association
↓↓ or ↑↑ = p < 10−5, with negative or positive association
↓↓↓ or ↑↑↑ = p < 10−6, with negative or positive association
↓↓↓↓ or ↑↑↑↑ = p < 10−9, with negative or positive association