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. Author manuscript; available in PMC: 2009 Aug 7.
Published in final edited form as: Phys Chem Chem Phys. 2008 Jun 3;10(29):4227–4239. doi: 10.1039/b804675c

Fig. 6.

Fig. 6

Effect of stem sequence permutations, Fig. 1d–g, of the hairpin of Fig. 1c (n = 13) on the free energy landscape as obtained from the KIS model (a–d). (Un)folding pathways characteristic of the above landscapes are represented by 1D profiles (e). The behavior for i + j < 6 is magnified in the lower right panel to illustrate the change in the unfolding barrier (f).