Skip to main content
. Author manuscript; available in PMC: 2009 Aug 7.
Published in final edited form as: Phys Chem Chem Phys. 2008 Jun 3;10(29):4227–4239. doi: 10.1039/b804675c

Table 1.

Overview of MD simulations. Unfolding events correspond to the breaching of all native contacts in the stem. The SSA fraction corresponds to the proportion of structures that can be topologically classified using the single sequence approximation.

Temperature/K Number of trajectories Time/ns Cumulative time/ns Unfolding events SSA fraction
300 4 20 – 100 320 0 0.99
320 3 100 300 0 0.99
350 3 100 300 0 0.98
400 79 100 – 360 12320 60 0.97
500 500 10 – 20 5310 491 0.94
600 500 1.5 750 492 0.94
700 500 1.0 500 500 0.95