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. 2008 Aug 21;36(17):5482–5515. doi: 10.1093/nar/gkn517

Table 3.

Calculated thermodynamics of unfolding of a B-DNA duplex in closed DNA

fGC [Na]/M Tm/K ΔH/ kcal mol−1 bp ΔG(293) kcal mol−1 ΔG(310) kcal mol−1
0.2 0.075 345.9 8.0 29.3 19.9
0.5 0.075 358.4 8.5 37.3 27.6
0.8 0.075 371 9.1 45.7 35.7
0.2 0.11 349 8 30.8 21.4
0.5 0.11 361.2 8.5 38.6 29
0.8 0.11 373.4 9.1 46.9 36.9
0.2 0.2 353.9 8 33 23.8
0.5 0.2 365.6 8.5 40.6 31.1
0.8 0.2 377.3 9.1 48.6 38.8

Loop size = 24 nt, i.e. for a 22-mer + 1 base at either end.