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. 2008 Sep 6;36(17):5695–5703. doi: 10.1093/nar/gkn569

Table 3.

Stabilization effect of [Ni2L3]4+-M (M) and [Ni2L3]4+-P (P) on different telomeric G-quadruplex DNA in 10 mM Tris, 100 mM NaCl (or 10 mM KCl), pH 7.2 buffer

DNA sequence In sodium buffer
In potassium buffer
Structure DNA Tm DNA+M ΔTm (°C) DNA+P ΔTm (°C) Structure DNA Tm DNA+M ΔTm (°C) DNA+P ΔTm (°C)
22mer-AG3(T2AG3)3 Human Telomeric Repeat, Antiparallel36 59.6 0 10.6 Human Telomeric Repeat, Hybrid 54.6 11.7 19.8
22mer- G4(T2G4)3 Tetrahymena Telomeric Repeat, Hybrid37 62.2 −3.1 −1.9 Tetrahymena Telomeric Repeat, Hybrid39 77.6 −4.4 −5.0
32mer-(T4G4)4 Oxytricha Telomeric Repeat, Antiparallel38 62.8 −5.0 −5.0 Oxytricha Telomeric Repeat, Antiparallel40 86.9 −6.0 −5.7
26mer AA-AG3(T2AG3)3-AA Antiparallel 47.5 −0.8 10.2 Hybrid42 61.8 7.0 18.8
26mer TT-AG3(T2AG3)3-TT Antiparallel 52.6 0 9.8 Hybrid42 59.8 5.2 14.1
24mer T-AG3(T2AG3)3-T Antiparallel 54.3 −0.2 9.2 Hybrid42 66.6 5.1 13.2

Meltings of human telomeric G-quadruplex DNA with different flanking sequences on the 5′ and 3′ terminus were measured in 10 mM Tris, 100 mM NaCl (or 100 mM KCl), pH 7.2 buffer. M- or P-enantiomer was fixed at 1 µM. DNA concentration was 1 µM/strand. The bold data serves as telomeric DNA reference.