Table 1.
Sequences used in the study with loop length varying from 5 to 18 bases
| Oligo name | Gene | Sequence (5′–3′) | L 1 | L 2 | L 3 | Total | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Q1 | VEGF | GGG | A | GGG | TTG | GGG | T | GGG | 1 | 3 | 1 | 5 |
| Q2 | WNT 3 | GGG | CC | GGG | C | GGG | AG | GGG | 2 | 1 | 2 | 5 |
| Q3 | WNT5A | GGG | A | GGG | CA | GGG | AA | GGG | 1 | 2 | 2 | 5 |
| Q4 | PDGFB | GGG | T | GGG | T | GGG | CTCT | GGG | 1 | 1 | 4 | 6 |
| Q5 | JUNB | GGG | TG | GGG | CG | GGG | CC | GGG | 2 | 2 | 2 | 6 |
| Q6 | TAL1 | GGG | G | GGG | CGGT | GGG | G | GGG | 1 | 4 | 1 | 6 |
| Q7 | THPO | GGG | TGG | GGG | AG | GGG | A | GGG | 3 | 2 | 1 | 6 |
| Q8 | FOS | GGG | GAGCT | GGG | A | GGG | A | GGG | 5 | 1 | 1 | 7 |
| Q9 | PIM1 | GGG | CG | GGG | CGG | GGG | CG | GGG | 2 | 2 | 3 | 7 |
| Q10 | FGF 3 | GGG | GGA | GGG | GC | GGG | TA | GGG | 3 | 2 | 2 | 7 |
| Q11 | FES | GGG | A | GGG | CT | GGG | ACCA | GGG | 1 | 2 | 4 | 7 |
| Q12 | VAV1 | GGG | CA | GGG | A | GGG | AACT | GGG | 2 | 1 | 4 | 7 |
| Q13 | IGF2 | GGG | T | GGG | CC | GGG | AGCTT | GGG | 1 | 2 | 5 | 8 |
| Q14 | FOSL1 | GGG | CTG | GGG | CG | GGG | CGC | GGG | 3 | 2 | 3 | 8 |
| Q15 | TAL1 | GGG | GCC | GGG | C | GGG | CGCG | GGG | 3 | 1 | 4 | 8 |
| Q16 | AKT2 | GGG | GGAG | GGG | GC | GGG | GG | GGG | 4 | 2 | 2 | 8 |
| Q17 | THRA | GGG | CG | GGG | GGC | GGG | GGC | GGG | 2 | 3 | 3 | 8 |
| Q18 | FBXW 7 | GGG | CGGC | GGG | GCC | GGG | G | GGG | 4 | 3 | 1 | 8 |
| Q19 | HRAS | GGG | GGGACT | GGG | C | GGG | CA | GGG | 6 | 1 | 2 | 9 |
| Q20 | WNT1 | GGG | AAAGA | GGG | CAT | GGG | A | GGG | 5 | 3 | 1 | 9 |
| Q21 | c-MYC | GGG | GA | GGG | TGGGGA | GGG | TG | GGG | 2 | 6 | 2 | 10 |
| Q22 | NFKB 2 | GGG | CGC | GGG | GCGC | GGG | CGC | GGG | 3 | 4 | 3 | 10 |
| Q23 | GLI 1 | GGG | CCGGC | GGG | A | GGG | CTGG | GGG | 5 | 1 | 4 | 10 |
| Q24 | HCK | GGG | GA | GGG | CC | GGG | CCAGAA | GGG | 2 | 2 | 6 | 10 |
| Q25 | HCK | GGG | CC | GGG | CCAGAA | GGG | AG | GGG | 2 | 6 | 2 | 10 |
| Q26 | YES 1 | GGG | T | GGG | AA | GGG | ACGCCGC | GGG | 1 | 2 | 7 | 11 |
| Q27 | AKT 1 | GGG | C | GGG | CGGCTCC | GGG | CGC | GGG | 1 | 7 | 3 | 11 |
| Q28 | BCL 2 | GGG | CCA | GGG | AGC | GGG | GCGGA | GGG | 3 | 3 | 5 | 11 |
| Q29 | NOTCH 1 | GGG | A | GGG | AGCGCAA | GGG | CGC | GGG | 1 | 7 | 3 | 11 |
| Q30 | c-KIT | GGG | TGG | GGG | CCCCGA | GGG | CT | GGG | 3 | 6 | 2 | 11 |
| Q31 | JUNB | GGG | CT | GGG | TT | GGG | CCAGGCC | GGG | 2 | 2 | 7 | 11 |
| Q32 | SRC | GGG | TGAGCT | GGG | CT | GGG | GCT | GGG | 6 | 2 | 3 | 11 |
| Q33 | VAV 2 | GGG | CGTG | GGG | ACTGC | GGG | TG | GGG | 4 | 5 | 2 | 11 |
| Q34 | AKT 2 | GGG | GGCTG | GGG | GGA | GGG | GGC | GGG | 5 | 3 | 3 | 11 |
| Q35 | MYB | GGG | CGGGGT | GGG | TG | GGG | CCC | GGG | 6 | 2 | 3 | 11 |
| Q36 | ROS 1 | GGG | GTGG | GGG | AT | GGG | AGATG | GGG | 4 | 2 | 5 | 11 |
| Q37 | TAL 1 | GGG | CGG | GGG | AGC | GGG | GGCCGC | GGG | 3 | 5 | 4 | 12 |
| Q38 | WNT1 | GGG | GGCCACC | GGG | CA | GGG | GGC | GGG | 7 | 2 | 3 | 12 |
| Q39 | CTTN | GGG | AGGAGGG | GGG | CA GG | GGG | C | GGG | 7 | 4 | 1 | 12 |
| Q40 | AXL | GGG | CT | GGG | CTGG | GGG | TGGAGGC | GGG | 2 | 4 | 7 | 12 |
| Q41 | FGF 3 | GGG | GATTGAT | GGG | GAGC | GGG | AG | GGG | 7 | 4 | 2 | 12 |
| Q42 | MAF | GGG | TGGA | GGG | CAGG CA | GGG | GAG | GGG | 4 | 6 | 3 | 13 |
| Q43 | MPL | GGG | CTGGCCT | GGG | AG | GGG | ATTG | GGG | 7 | 2 | 4 | 13 |
| Q44 | MYB | GGG | AGGCGGC | GGG | ACT | GGG | CGC | GGG | 7 | 3 | 3 | 13 |
| Q45 | ABL 1 | GGG | CC | GGG | GGAGG | GGG | TGTCTC | GGG | 2 | 5 | 6 | 13 |
| Q46 | MYEOV | GGG | TAAA | GGG | AGGAGGA | GGG | AA | GGG | 4 | 7 | 2 | 13 |
| Q47 | VEGF | GGG | AG | GGG | ACTGG | GGG | AAGGATA | GGG | 2 | 5 | 7 | 14 |
| Q48 | FLI 1 | GGG | AGGAAGA | GGG | GGTGT | GGG | GG | GGG | 7 | 5 | 2 | 14 |
| Q49 | FGR | GGG | CTTTT | GGG | AAGG CC | GGG | CTG | GGG | 5 | 6 | 3 | 14 |
| Q50 | WNT 3 | GGG | CT C | GGG | AGGG | GGG | CGGCTGC | GGG | 3 | 4 | 7 | 14 |
| Q51 | CSF 1R | GGG | CA GGA | GGG | TGT | GGG | GCTGCA | GGG | 5 | 3 | 6 | 14 |
| Q52 | THRA | GGG | CGCGGCA | GGG | GGC | GGG | GGGC | GGG | 7 | 3 | 4 | 14 |
| Q53 | FES | GGG | CCCTG | GGG | CCTGCG | GGG | CGC | GGG | 5 | 6 | 3 | 14 |
| Q54 | REL | GGG | ACAGGCA | GGG | GCG | GGG | CGCT | GGG | 7 | 3 | 4 | 14 |
| Q55 | FGF 4 | GGG | AGAC | GGG | GAC | GGG | GACAGGCA | GGG | 4 | 3 | 8 | 15 |
| Q56 | BCL 3 | GGG | TCCCCA | GGG | GT | GGG | GTTGGAT | GGG | 6 | 2 | 7 | 15 |
| Q57 | KRAS | GGG | CGGTGT | GGG | AAGA | GGG | AAGAG | GGG | 6 | 4 | 5 | 15 |
| Q58 | THPO | GGG | TGG | GGG | AGGGGA | GGG | AGGGGCT | GGG | 3 | 6 | 7 | 16 |
| Q59 | RALB | GGG | TCCTA | GGG | GATGG | GGG | GCAGGT | GGG | 5 | 5 | 6 | 16 |
| Q60 | EGFR | GGG | GACC | GGG | TCCAGA | GGG | GCAGTGCT | GGG | 4 | 6 | 8 | 18 |
| Q61 | VAV 1 | GGG | TTTTGT | GGG | CCTT | GGG | GAGGACTT | GGG | 6 | 4 | 8 | 18 |
| Q62 | FGF 6 | GGG | CGATGAT | GGG | TGGAG | GGG | AGGGCC | GGG | 7 | 5 | 6 | 18 |