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. 2008 Sep 2;36(17):5652–5659. doi: 10.1093/nar/gkn525

Table 6.

Thermodynamic parameters for duplex formation in 1 M NaCla

Average of curve fits
Tm−1 versus log Ct plots
Sequences −ΔHo (kcal/mol) −ΔSo (e.u.) −ΔGo37 (kcal/mol) Tmb (°C) −ΔHo (kcal/mol) −ΔSo (e.u.) −ΔGo37 (kcal/mol) Tmb (°C)
(AUGGCCG)2 46.8 ± 4.90 122.0 ± 15. 9.0 ± 0.3 60.3 44.8 ± 1.8 116.3 ± 5.6 8.8 ± 0.1 59.9
(CUGGCCG)2 51.1 ± 1.8 135.2 ± 5.6 9.2 ± 0.1 59.7 50.2 ± 0.7 132.5 ± 2.0 9.1 ± 0.1 59.7
(GUGGCCG)2 48.0 ± 2.8 126.0 ± 8.5 9.0 ± 0.2 59.7 49.2 ± 1.7 129.7 ± 5.3 9.0 ± 0.1 59.5
(UUGGCCG)2 43.4 ± 6.2 111.9 ± 18.8 8.7 ± 0.5 60.2 42.3 ± 3.8 109.1 ± 11.6 8.5 ± 0.2 59.0
(UGGCCG)2c 51.4 138.5 8.4
(AGCCGGU)2 55.9 ± 5.1 150.2 ± 15.7 9.3 ± 0.3 58.8 55.1 ± 4.4 147.8 ± 13.4 9.3 ± 0.3 58.7
(CGCCGGU)2 57.9 ± 1.8 156.7 ± 21.5 9.3 ± 0.4 57.8 57.6 ± 4.8 156.0 ± 14.8 9.2 ± 0.3 57.5
(GGCCGGU)2 57.2 ± 4.2 154.6 ± 3.3 9.2 ± 0.2 57.4 62.6 ± 2.5 171.4 ± 7.7 9.4 ± 0.1 56.9
(UGCCGGU)2 53.8 ± 4.1 144.6 ± 12.5 9.0 ± 0.3 57.3 54.8 ± 3.4 147.7 ± 10.3 9.0 ± 0.2 57.0
(GCCGGU)2c 58.8 159.6 9.2

aSolutions are 1.0 M NaCl, 10 mM sodium cacodylate, 0.5 mM EDTA pH 7.

bCalculated at 10−4 M oligomer concentration.

cRef. (34).