Figure 5. Gbrowse view of gene, transposable element and small RNA annotation of 20 kb segments centered on the 2 CpG island containing genes selected with the genetic (GSTU10 and MAPK12) and pharmacologic (TTG1 and SUVH8) approaches.

Gene annotation is from TAIR (v7). TE annotation was performed using a novel detection pipeline (HQ, NB, and VC, manuscript in preparation). Small RNA data were directly imported from the ASRP database (http://asrp.cgrb.oregonstate.edu/cgi-bin/gbrowse/thaliana-v5) and corresponded to deep sequencing of small RNAs extracted from wild type plants (seedlings, leaves, and flowers).