Table 2.
Tertiary H-bonds in the Minor Groove Triplex
Interacting nucleotides | Distance [Å] | |
---|---|---|
Loop 2 | Stem 1 | |
A20 2’-OH | C16 2’-OH | 2.63 |
A20 2’-OH | C4 O2 | 3.53 |
A20 N7 | C4 2’-OH | 3.29 |
A20 N6 | C4 O4’ | 3.54 |
A20 N3 | G3 N2 | 2.99 |
A20 N1 | C4 O4’ | 3.04 |
A21 N6 | G15 3’-O | 3.32 |
A21 N6 | G15 2’-OH | 2.89 |
A21 N7 | G15 2’-OH | 2.89 |
C22 N4 | G15 2’-OH | 3.23 |
A23 N1 | C14 2’-OH | 2.71 |
A23 N6 | C14 O2 | 2.92 |
A23 N6 | G5 N2 | 3.42 |
A24 N6 | G6 2’-OH | 2.97 |
A24 N6 | G6 N3 | 3.04 |
A24 N1 | G6 N2 | 3.03 |
A25 N1 | C13 2’-OH | 2.58 |
A25 N6 | G6 N2 | 3.55 |