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. Author manuscript; available in PMC: 2008 Sep 29.
Published in final edited form as: Biochemistry. 2005 Aug 30;44(34):11315–11322. doi: 10.1021/bi051061i

Table 2.

Tertiary H-bonds in the Minor Groove Triplex

Interacting nucleotides Distance [Å]
Loop 2 Stem 1
A20 2’-OH C16 2’-OH 2.63
A20 2’-OH C4 O2 3.53
A20 N7 C4 2’-OH 3.29
A20 N6 C4 O4’ 3.54
A20 N3 G3 N2 2.99
A20 N1 C4 O4’ 3.04
A21 N6 G15 3’-O 3.32
A21 N6 G15 2’-OH 2.89
A21 N7 G15 2’-OH 2.89
C22 N4 G15 2’-OH 3.23
A23 N1 C14 2’-OH 2.71
A23 N6 C14 O2 2.92
A23 N6 G5 N2 3.42
A24 N6 G6 2’-OH 2.97
A24 N6 G6 N3 3.04
A24 N1 G6 N2 3.03
A25 N1 C13 2’-OH 2.58
A25 N6 G6 N2 3.55