Table 1.
Details of SNPs used for association analysis.
|
MINOR ALLELE FREQUENCY (allele 2 unless otherwise indicated) |
|||||
|---|---|---|---|---|---|
|
SNP NUMBER |
refSNP ID |
based on dbSNP data, Caucasians only |
in unrelated cases |
Allele1 | Allele2 |
| SNP1 | rs198175 | 0.24 (allele1) | 0.28 | G | A |
| SNP2 | rs447292 | 0.37 | 0.37 | G | A |
| SNP3 | rs4787924 | 0.50 0.51(allele1) |
0.51 | A | G |
| SNP4 | rs2239341 | 0.24 | 0.23 | A | C |
| SNP5 | rs1494550 | 0.32 | 0.28 | T | C |
| SNP6 | c-597delT | unavailable | 0.06 | T | delT |
| SNP7 | rs965830 | 0.51(allele1) | 0.52 | T | G |
| SNP8 | rs2214437 | 0.47 | 0.48 | T | A |
| SNP9 | rs2238499 | 0.32 | 0.28 | G | A |
| SNP10 | rs2238500 | 0.47(allele1) | 0.45 | G | A |
| SNP11 | rs2247011 | 0.28 | 0.32 | A | G |
| SNP12 | rs739747 | 0.27(allele1) | 0.30 | A | T |
| SNP13 | rs1557809 | 0.23 | 0.16 | T | C |
| SNP14 | rs7200040 | 0.36(allele1) | 0.34 | A | G |
| SNP15 | rs757200 | 0.32 | 0.26 | C | T |
| SNP16 | rs2238511 | 0.26 | 0.24 | T | C |
| SNP17 | rs2238518 | 0.43 | 0.48 | T | C |
| SNP18 | rs2238521 | 0.18 | 0.09 | G | A |
| SNP19 | rs2189290 | 0.36 | 0.34 | T | C |
| SNP20 | rs714822 | 0.16 | 0.13 | C | G |
| SNP21 | rs960350 | 0.51 | 0.43 | T | C |
| SNP22 | rs12932291 | 0.20 | 0.21 | C | G |
| SNP23 | rs985729 | 0.50(allele1) | 0.46 | T | C |