Table 1. Proteomes searched.

Phylum	Sub-phylum	Species	Database	Reference
Ascomycota	Hemiascomycota	Saccharomyces cerevisiae	SGD	[42]
		Candida glabrata	Génolevures	[16]
		Kluyveromyces lactis	Génolevures	[16]
		Eremothecium gossypii	AGD	[43]
		Candida albicans	CandidaDB	[44]
		Debaryomyces hansenii	Génolevures	[16]
		Yarrowia lipolytica	Génolevures	[16]
	Euascomycota	Neurospora crassa	Broad Institute	[45]
		Aspergillus nidulans	Broad Institute	[46]
	Archeascomycota	Schizosaccharomyces pombe	Wellcome Trust	[47]
			Sanger Institute
Basidiomycota		Cryptococcus neoformans	Stanford Genome	[48]
			Technology Center
Zygomycota		Rhizopus oryzae	Broad Institute	Rhizopus sequencing project (2005)

The species are listed in order from the Saccharomyces cerevisiae reference and according to the phylogenetic tree computed by [25]. Proteomes were downloaded as FASTA files.