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. 2008 Sep 16;9(Suppl 2):S6. doi: 10.1186/1471-2164-9-S2-S6

Table 1.

Description of bin distributions in the MapMan platform.

Bin Name Elements p-value
1.1 PS.lightreaction 59 0.04
1.1.4 PS.lightreaction.ATP synthase 6 0.01
TCA/org. transformation.other organic acid
8.2.11 transformaitons.atp-citrate lyase 2 0.03
10.2 cell wall.cellulose synthesis 14 0.01
lipid metabolism.FA synthesis and FA elongation.long
11.1.9 chain fatty acid CoA ligase 5 0.004
12 N-metabolism 13 0.03
12.2 N-metabolism.ammonia metabolism 8 0.04
amino acid metabolism.synthesis.aspartate
13.1.3.4 family.methionine 9 0.046
16.1.4 secondary metabolism.isoprenoids.carotenoids 6 0.04
secondary metabolism.phenylpropanoids.lignin
16.2.1 biosynthesis 18 0.006
16.7 secondary metabolism.wax 4 0.027
16.8.2 secondary metabolism.flavonoids.chalcones 3 0.006
hormone metabolism.brassinosteroid.synthesis-
17.3.1.1.1 degradation.BRs.DET2 3 0.02
19.1 tetrapyrrole synthesis.magnesium chelatase 2 0.03
26.3 misc.gluco-, galacto- and mannosidases 22 0.01
27.1 RNA.processing 71 0.01
RNA.regulation of transcription.TCP transcription factor
27.3.29 family 6 0.04
29.1 protein.aa activation 32 0.02
29.2 protein.synthesis 200 0.004
protein.synthesis.chloroplast/mito – plastid ribosomal
29.2.1 protein 36 0.007
protein.synthesis.chloroplast/mito – plastid ribosomal
29.2.1.1 protein.plastid 21 0.04
29.2.2 protein.synthesis.misc ribososomal protein 106 0.01
29.4 protein.postranslational modification 186 0.03
protein.postranslational modification.kinase.receptor like
29.4.1.51 cytoplasmatic kinase I 2 0.03
29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX 58 0.01
29.6 protein.folding 25 0.006
30 signalling 267 0.02
30.3 signalling.calcium 59 0.01
35 not assigned 2150 0.02
35.2 not assigned.unknown 1191 0.003

The bin number of the microarray was also denoted from 1–100 and it was only shown for the bins with significant changes in transcript abundance at P < 0.05.