Table 2.
Mapping 100 000 randomly perturbed reads with SeqMap, ELAND, SOAP and RMAP
Software | Running time (s) | Memory used (MB) | Mapped reads |
---|---|---|---|
SeqMap | 82 | 923 | 78 211 |
ELAND | 3 | 261 | 27 561 |
SOAP | 2 | 142 | 38 256 |
RMAP | 4 | 232 | 31 891 |
Mapping 100 000 randomly perturbed reads with SeqMap, ELAND, SOAP and RMAP
Software | Running time (s) | Memory used (MB) | Mapped reads |
---|---|---|---|
SeqMap | 82 | 923 | 78 211 |
ELAND | 3 | 261 | 27 561 |
SOAP | 2 | 142 | 38 256 |
RMAP | 4 | 232 | 31 891 |