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. 2008 Oct 1;105(40):15393–15398. doi: 10.1073/pnas.0802991105

Table 1.

Bound ions, lengths, and initial structures of the simulation runs investigated in this work

Run Initial structure* Bound ions at
Simulation length, ns
Site 4 Site 6 Site 5
C465 X-ray; 5–262 Mg2+ Mg2+ Mg2+ 10.5
C0 X-ray; 5–262 20
C5 X-ray; 5–262 Mg2+ 10.5
C46 X-ray; 5–251 Mg2+ Mg2+ 10
Na5 X-ray; 5–262 Na+ 10
Ca5 X-ray; 5–262 Ca2+ 12
O5 From C0 run; 132–251 Mg2+ 30 × 2
O465 From C0 run; 5–251 Mg2+ Mg2+ Mg2+ 50

*The numbers indicate protein residues included in the simulations.