Table 1. Association between total IgE and selected SNPs in the GWAS sample and in the four replication samples.
GWAS KORA S3/F3 | Replication KORA S4 | Replication GINI | Replication LISA | Replication ISAAC | Combined | ||||||||||||||
n = 1,530 | n = 3,890 | n = 1,839 | n = 1,042 | n = 2,998 | n = 9,769 | ||||||||||||||
Gene | SNP | Est. | P value | Est. % | Est. | P value | Est. % | Est. | P value | Est. % | Est. | P value | Est. % | Est. | P value | Est. % | Est. | P value | Est. % |
FCER1A | rs2511211 | −0.206 | 9.28E-08 | −18.59 | |||||||||||||||
FCER1A | rs10489854 | 0.153 | 2.85E-02 | 16.52 | |||||||||||||||
FCER1A | rs2494262 | 0.122 | 1.67E-04 | 12.99 | |||||||||||||||
FCER1A | rs2427837 | −0.235 | 6.19E-05 | −20.94 | −0.212 | 3.23E-09 | −19.12 | −0.219 | 2.51E-05 | −19.64 | −0.280 | 6.58E-05 | −24.56 | −0.145 | 4.27E-04 | −13.53 | −0.202 | 7.08E-19 | −18.27 |
FCER1A | rs12565775 | 0.119 | 2.45E-02 | 12.56 | |||||||||||||||
FCER1A | rs2427824 | 0.082 | 2.52E-02 | 8.49 | |||||||||||||||
FCER1A | rs3845625 | 0.085 | 5.09E-02 | 8.82 | |||||||||||||||
FCER1A | rs2427827 | 0.120 | 2.45E-04 | 12.72 | |||||||||||||||
FCER1A | rs2251746 | −0.227 | 6.07E-10 | −20.29 | −0.236 | 8.14E-06 | −20.99 | −0.290 | 4.18E-05 | −25.17 | −0.153 | 2.11E-04 | −14.16 | −0.213 | 1.85E-20 | −19.21 | |||
RAD50 | rs2069812 | −0.052 | 1.42E-01 | −4.98 | |||||||||||||||
RAD50 | rs2706347 | 0.236 | 4.05E-05 | 26.62 | 0.143 | 2.26E-04 | 15.43 | 0.122 | 2.91E-02 | 13.02 | 0.118 | 1.01E-01 | 12.56 | 0.095 | 2.70E-02 | 9.96 | 0.120 | 6.28E-07 | 12.80 |
RAD50 | rs6884762 | 0.034 | 7.22E-01 | 3.46 | |||||||||||||||
RAD50 | rs17772565 | −0.096 | 2.27E-01 | −9.17 | |||||||||||||||
RAD50 | rs17772583 | −0.058 | 1.24E-01 | −5.62 | |||||||||||||||
RAD50 | rs3798135 | 0.227 | 6.58E-05 | 25.48 | 0.142 | 2.32E-04 | 15.20 | 0.173 | 2.00E-03 | 18.91 | 0.107 | 1.37E-01 | 11.26 | 0.101 | 1.75E-02 | 10.64 | 0.129 | 6.69E-08 | 13.82 |
RAD50 | rs2040704 | 0.221 | 9.25E-05 | 24.73 | 0.140 | 2.47E-04 | 14.97 | 0.158 | 4.40E-03 | 17.14 | 0.111 | 1.21E-01 | 11.73 | 0.112 | 8.22E-03 | 11.83 | 0.130 | 4.46E-08 | 13.90 |
RAD50 | rs7737470 | 0.231 | 4.81E-05 | 25.99 | 0.142 | 2.27E-04 | 15.28 | 0.163 | 3.70E-03 | 17.70 | 0.100 | 1.64E-01 | 10.55 | 0.087 | 4.13E-02 | 9.12 | 0.123 | 3.35E-07 | 13.07 |
RAD50 | rs2240032 | 0.137 | 4.01E-04 | 14.67 | |||||||||||||||
RAD50 | rs2214370 | 0.136 | 5.95E-01 | 14.54 | |||||||||||||||
STAT6 | rs12368672 | 0.167 | 8.52E-04 | 18.18 | 0.156 | 2.03E-06 | 16.93 | 0.016 | 7.34E-01 | 1.65 | 0.075 | 2.44E-01 | 7.78 | 0.108 | 1.52E-05 | 11.44 |