TABLE 1.
CHROMagar orientation organism identification by Biomic V3 compared to experienced technologists using visual and conventional methods
| Organism(s)a | No. of isolates from:
|
Agreement between methods (%) | Color likeness (%)b
|
||
|---|---|---|---|---|---|
| Pure cultures | Mixed cultures | Avg | Range | ||
| Escherichia coli | 44 | 8 | 98 | 71 | 24-100 |
| Enterococcus species | 37 | 23 | 88 | 87 | 35-100 |
| Klebsiella, Enterobacter, and Serratia group | 45 | 13 | 95 | 87 | 34-100 |
| Proteus, Morganella, and Providencia group | 23 | 3 | 100 | 95 | 67-100 |
| Staphylococcus saprophyticusc | 6 | 1 | 86 | 97 | 80-100 |
| Group B streptococci | 4 | 4 | 100 | 86 | 42-100 |
| Other (staphylococci, yeast, Pseudomonas aeruginosa, others)d | 23 | 12 | 83d | NA | NA |
| Total isolates | 182 | 64 | 94 | ||
A positive result from a pyrrolidonyl aminopeptidase test (performed with blood agar) is required to distinguish Enterococcus spp. from group B streptococci. Some color overlap is common between these two species, so laboratory protocols should include the performance of PYR when such morphologies are seen. Very young (small) colonies of the Enterobacter group could also be mistaken for Enterococcus due to similar color ranges, although additional incubation results in increased colony size for Enterobacter group strains but not for enterococci, which can be distinguished by a microbiologist.
Color likeness is the percentage of color that matches the established color profile for each species. A higher percentage indicates a more typical color on CHROMagar orientation plates. A lower percent color likeness indicates greater heterogeneity in color reactions of a genus or species (e.g., E. coli). NA, not applicable.
Colony morphology, Gram staining, specimen source, and novobiocin 5-μg disk diffusion (resistance) are required to identify S. saprophyticus. Biomic misidentified one isolate as S. saprophyticus.
Four of thirty-five organisms had an incorrect color reading by the instrument, which led to incorrect (i.e., false-positive) identifications.