Table 2.
UCR elements used in this Study
| GATA | See Additional File 4 | [78,79] |
| NFkB1 | GGKGATYYAC | Aedine consensus [72] |
| NFkB2 | KGGGAWHMMM | Anopheline consensus [72] |
| NFkB4 | KGKGAWHHMM | Cross-species consensus |
| NFkB7 | GGGAWHM | Subset of NFkB-related TFBSs, analyzed with higher stringency |
| JAK-STAT | TTCTAGGAA, TTTCTAAGAAA | [69,95] |
| BR-C Z1 | TAAWWRACAARW | [96] |
| BR-C Z2 | TTWWCTATTT | [96] |
| BR-C Z3 | WAAACWWRW | [96] |
| BR-C Z4 | RKAAASA | [96] |
| M1 | MSMYCCACCCMCTCC | Aedes-specific |
| M2 | SMCWCCCACCYMCYC | Aedes-specific |
| M7 | RCMRCARCARCARCA | Anopheles-specific |
| M8 | SCRMMRCAGCARCAGCARCM | Anopheles-specific |
| M9 | KTGTGTGTGTGTKYG | Anopheles-specific |
| M12 | AAGAATTTAAGAATT | Culex-specific |
| M13 | TTYTTAAATTYTYAA | Culex-specific |
| M17 | AACTTTTT | Culex-specific |
| M19 | CCCMCCCCCCCCCYYY | miRNA pathway-specific |
| M21 | SRGBSGCSGKRSSGG | miRNA pathway-specific |
| M24 | CCRCMRCARCMGCWRCMRCM | siRNA pathway-specific |
| M26 | TYTGAG | siRNA pathway-specific |
| M30 | CGAGCKRCTSSRASYWGGTT | PIWI pathway-specific |
IUPAC consensus codes used, wherein "K" is T or G; "Y" is T or C; "W" is T or A; "R" is A or G; "S" is C or G; "M" is C or A; "H" is A, T, or C; "V" is A, C or G; "B" is C, T, or G; "D" is A, T, or G.