Table 2.
Results of the simple and multiple linear regression analyses
| Explanatory variable(s) | Data Source | r2 | p | Coefficient |
| Methylation frequency | [24,25] | 0.8 | <2E-16 | n.r. |
| 0.8 | <2E-16 | n.r. | ||
| Frequency of genes target of H3k27me3 | [30] | 0.12 | 0.000207 | n.r. |
| Gene size | TAIR Genome v6.0 | 0.02 | >0.01 | n.r. |
| Cis-acting elements | [48] | 0.05 | >0.01 | n.r. |
| TATA-box frequency | (MotifSearch, [26]) (PlantProm, [26]) |
0.49 0.68 |
<2E-16 <2E-16 |
n.r. n.r. |
| Methylation + TATA-box | [24]+ (MotifSearch, [26]) | 0.84 | <2E-16a 0.0002b |
-201.5a 35b |
| [24] + (PlantProm, [26]) | 0.86 | <2E-16a 1.00E-09b |
-168a 50.5b |
|
| [25] + (MotifSearch, [26]) | 0.87 | 2.00E-16a 5.00E-09b |
-158.6a 54.8b |
|
| [25] + (PlantProm, [26]) | 0.84 | <2E-16a 0.0006b |
-194.3a 39b |
|
Column 1 reports the explanatory variables used to model gene responsiveness. Column 2 indicates the source of the data (reference). Columns 3 and 4 report the different statistics obtained with the linear regression. n.r., not reported; n.d., not determined. a, statistics for methylation variable. b, statistics for TATA-box variable. Column 5 shows the coefficients from the linear regression analysis.