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. 2008 Oct 22;3(10):e3490. doi: 10.1371/journal.pone.0003490

Table 6. Linkage disequilibrium analysis between SNPs rs7326018 and rs1327328 and neighboring SNPs in chromosome 13.

SNP pairs D′ r2 Chi2 P value
rs7326018 rs1330943 0.3836 0.0023 0.4106 0.5217
rs1327328 0.9539 0.9099 163.7904 1.89×10−15
rs9588771 0.0000 - 0 1
rs6492466 0.0563 0.0014 0.2467 0.6194
rs9583760 0.2725 0.0282 5.0707 0.0243
rs4284505 0.5002 0.1192 21.4486 3.63×10−6
rs9589207 1.0000 0.0165 2.9644 0.0851
rs1327328 rs1330943 0.3836 0.0023 0.4106 0.5217
rs9588771 0.0000 - 0 1
rs6492466 0.0563 0.0014 0.2467 0.6194
rs9583760 0.2725 0.0282 5.0707 0.0243
rs4284505 0.5668 0.153 27.5447 1.54×10−7
rs9589207 1.0000 0.0165 2.9644 0.0851

SNPs rs1330943 and rs9588771 are located in ENSG00000165618 and ENSG00000184837 genes respectively; rs6492466 and rs9583760 are located within LOC121727; rs4284505 is located close to a cluster of microRNAs and rs9589207 within the hsa-mir-92a-1 microRNA. Linkage disequilibrium measures are highly significant between SNPs rs1327328 and rs7326018 and SNP rs4284505, and marginally significant with SNP rs9583760 (p values are represented in bold).