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. Author manuscript; available in PMC: 2009 Aug 1.
Published in final edited form as: J Proteome Res. 2008 Jun 19;7(8):3373–3381. doi: 10.1021/pr800129m

Table 1.

Ion Seta

C-terminal ions y, y + 1, y + 2, y − H2O, y − NH3, y − H3PO4
N-terminal ions b, b + 1, b − H2O, b − NH3, b − H3PO4, b − H2O − H3PO4, b − NH3 − H3PO4
fragments with
a +2 charge		 y2+, y2+ + 1, y2+ − H2O, y2+ − NH3, y2+ − H3PO4
b2+, b2+ + 1, b2+ − H2O, b2+ − NH3, b2+ − H3PO4
a

Ions included in the Bayesian Network.