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. 2008 Oct;180(2):1137–1152. doi: 10.1534/genetics.108.087924

TABLE 3.

Ninety-one selected cytochrome P450s (CYP), esterases (CCE), or glutathione transferases (GST) and various oxidase genes and associated primers and conditions for PCR amplification

Gene Vector base Contig Forward primer Reverse primer Ta Prod. size
Polymorphic by SSCP
Esterases
    CCEae1oa AAEL004341 1.115 AGGTCCAGAAGCCAAACAGG GGAAGCAGGTGTAGGTTCAGAGTA 61 394
    CCEae1A AAEL005113 1.142 CAAGAGTTGCCACTGGATGA ATAGGCTGCCATTACGAACA 52 147
    CCEae5A AAEL005123 1.142 ACTTGGCTTTCTTTGCCTACC CCGCTTTGAGCGATTACTTTAT 52 222
    CCEjhe1F AAEL005200 1.145 TTGTGATGAGTGGGAATGCG TCGGTACAGTGTCAATGGGTCT 57 218
    CCEunk7oa AAEL008757 1.347 ACGGAGTCTTTCTTGAAGGGTAA CACTAACTGCACGAAGCGATG 61 318
    CCEunk4o AAEL001517 1.35 CTGCTGCTGCCACATACC CGCCGTGCTTCCAATC 57 347
    CCEae2Da AAEL010389 1.474 CGAGCGATTGTTATGTCTGG AGCCCTTCTTCCGAGTTTC 57 344
    CCEae4B AAEL002376 1.55 AAACCCGAAGTGGCTTGT GCTCTTGGTAACCGTGGC 61 359
    CCEae6B AAEL002378 1.55 CCATCGCAAAGCACCAG TCAATAGCAAGCATTCCCTC 61 205
    CCEbe2oa AAEL012509 1.704 AGAAATCCGCCGAGAAAGC GGAGTAAGGGAACCTGATGGAA 61 267
    NS-COE1 AAEL003201 1.81 TATGACTAATCTTCCCATCACTCCA GATAATGACCCGCAACCAAGT 57 212
Cytochrome P450s
    CYP304C1 AAEL014413 1.1104 CTTCCATTCGGTGCGGGTAA TGTCGTCGTGGTTAAAGGGTTAGTT 61 277
    CYP301A1 AAEL014594 1.1181 CAAGAGTGCCACAAAGCGTATGA CAATCACGGTACTGTAAACCCTAAGAA 61 338
    CYP9J24 AAEL014613 1.1188 ACTTCGCTGCTCTACACTT TACTTGATTCCGTTTCCTT 52 211
    CYP9J26 AAEL014609 1.1188 GAAACGGCGGAGCAT GTCCACCTTGATTCCAAAA 61 370
    CYP9J27v1 AAEL014616 1.1188 GATTCGCCACCGTTCA GAGTTTCGGATACCACCAT 61 202
    CYP9J28 AAEL014617 1.1188 TTTGCGAACGATGTGAT GTTCCCGCTCCCTAAT 52 263
    CYP6F2 AAEL014678 1.1219 CGAACGCAGCAAACAATGGC CGTGTTGTAGCGGGCAAGGAT 61 305
    CYP6BB2a AAEL014893 1.1327 GTAGTCGCTAAGGACGGAGGAGA GATCGTGGTGCATCGAGTGG 61 240
    CYP6CD1 AAEL005006 1.138 GAAGTTGACCGTTGGATGCG TGGTGTAATCCGTAGGCTTTCC 61 252
    CYP325R1a AAEL005775 1.174 GTGCTACGGTGTTCCTTGGT CCTTTCGGTTGGGTTTCC 61 214
    CYP9J10 AAEL006798 1.221 AGGGTTCGTTGAGGCA GGTTTACCGTTCAGTGATTT 57 389
    CYP9J15 AAEL006795 1.221 AAGGGCAACCTGAAGCACTCTG TCCTCGTACAAACGGGACTGAA 61 359
    CYP9J19a AAEL006810 1.221 TGGACGGATAATGAGTTGA TGTCTATGGTCGGAGGC 57 266
    CYP9J8v1 AAEL006811 1.221 CTTCGCTGCCGTTATCT TTGACACCGATTTGCTTG 57 381
    CYP6AG5 AAEL006984 1.231 CTAACGAAGTCGGAGGAACG GGGCAATGGACGAAATGA 57 287
    CYP4H32a AAEL007812 1.283 CGCTGCGATTACTTCCACC TCGAACGACCGTCATCTTCA 61 282
    CYP9M4 AAEL001320 1.29 CGTCGCAGCCTTCTTAGTTT CCCAATGATAGGGTCCACCT 57 384
    CYP4C52a AAEL008023 1.295 TTCGACATCGTGCCCTTCAC TTCTTGCGACAGCAACTGGTTA 61 255
    CYP4G35a AAEL008345 1.318 GCTTGGCGATGGGCTGTT CATAATCAAATCCCTCCTTGCTCT 57 304
    CYP6P12V2a AAEL014891 1.327 GGCAGGTCACCAACAAGCA ATCACCGATTCCCGCTCCC 57 380
    CYP9J32a AAEL008638 1.352 TCGGGTAATGGGACTAA GACTCCGTTGTTTCTTGTT 52 211
    CYP6AL1 AAEL008889 1.354 GCGGCTCAGGTGTTTGTG CGGCTGTGCCTTTGTCTAT 61 350
    CYP6N9 AAEL009121 1.371 GAAAGCATCCGCCAGCAT GCAAGGTCGCCAATCCC 63 354
    CYP9M8a AAEL009591 1.41 ATTGAGTGGACCGATTACGACA GGATTCGGGAAGAAATGTGG 61 358
    CYP6AL3a AAEL009656 1.415 ATTTGATTACTTCGCTCCGTTTGG TGCCTGGATGTCCTGATGTCG 61 291
    CYP6AG8 AAEL015654 1.4359 TGACTGTTCTCCCGAGTGTTG GGTTTAGCGAAAGGGTGGC 61 338
    CYP4AR2 AAEL010154 1.457 CACTTCGCATGTTCCCTCC TCTTAGTGGCATTTCGTCCTG 61 208
    CYP325Z1 AAEL010273 1.467 GGTGGGCAACGAAACATCTAC AGCAGCAAACGGGACAGC 57 271
    CYP12F5a AAEL001960 1.47 TTTGGAAGTCACTGGCGTAAT TTGGGCATCGGTGTTTGT 57 233
    CYP305A5 AAEL002043 1.48 GGATTGTACGCTGGGAGGA AACTTTGTATGGCTTTGGTGAGA 61 256
    CYP302A1 AAEL011463 1.581 AAAAGACTGCCGTTGAGTTGG GAGATAGGGTTGAGCCGAAGAG 61 245
    CYP303A1 AAEL012144 1.66 TTGGTGAAGGCAGGAAACG TGAATGGAAAGTGGCTGAAAA 57 282
    CYP6BY1a 1.7 TCACGCCGCTGTTCCTATT CCGCCACTTGTTACCTTCG 61 247
    CYP6P12V1a AAEL012491 1.702 GGACAGTCGGAAGCGGGAGT GCAGCAGCAAGTTCATAAAGTCGT 61 311
    CYP325M1 AAEL012773 1.738 TTGCCGACGGGCTCAA TGGCGGGTCCTAAAGATGA 61 210
    CYP4H30a AAEL003399 1.85 CAATCCGCATGTTCAAGACAA AATCGCTGACCAATACAGTTCC 61 264
    CYP4J13 AAEL013555 1.869 ATGGAGTCTACAATCTGTTTGGGTAT AACCTGCTGCGGTCGTGTC 61 319
    CYP9AE1a AAEL003748 1.96 CATCCTTATCGGCTTCCAGTTTT AAGGTGGCGAGGTTTCTGCT′3 61 392
Glutathione-S-transferases
    GSTx1 AAEL000092 1.1 CCCAAATCAACCGAGTTCTTCA GCCTGGTCCTCCTCGTATCCT 61 322
    GSTd2 AAEL001078 1.22 TGGCGTTGAGTTGAATCCG TGCCTCCGCAAATCGTG 61 268
    GSTe2 AAEL007951 1.291 CACCCTGTCGGGCAGTGGAA TTGGCTTGCTTAACCAGTTCTTTC 52 308
    GSTe4 AAEL007962 1.291 TATTGGTTTGGACCTGGATGTT ATAGATGATGATGGCGTGGC 57 229
    GSTe5 AAEL007964 1.291 TATGGGAAGGACGATAGTTTGTA AAGTCATCGGTCAGGGCATC 57 279
    GSTe6 AAEL007946 1.291 CGATGCGGTTCTGCCGATAA GCCAATTTCTTTGCACCTTCTC 52 208
    GSTe7a AAEL007948 1.291 TGTTTCCGAGACTGCG TGACTGTTCCATCCGTTTA 52 372
    GSTt3 AAEL009020 1.362 CAGAACGTGAACCGCTTTGGG ACCTTCGCCTGATTGACTTCCA 61 260
    GSTz1 Unannotated 1.632 AGCGTGCCAAGGTTCGGGAGA GGATGATCGGATACGGGCGTAGAT 61 276
Monomorphic by SSCP
Esterases
    CCEunk5o AAEL000546 1.1 CACGGAGATGATCTGGGCTAC GCTTCAAGACGGGAACACCTAT 57 308
    AaeCOE-15 AAEL004022 1.105 GATGACGGGCGTGGATTG GGCTGTTACTATGGCAGGAAGAT 61 372
    CCEae4A AAEL005101 1.142 CGAACTGACTCGGCTACTTTC TGCTGCCCTTCTTTACGG 50 248
    CCEglt3H AAEL000905 1.18 TGGTGCTGTCGCTGTTTCTG CGTAAGGGTATCCACGGCTAAT 61 275
    CCEae3B AAEL002385 1.55 GCAACCCTCCAAGCCTTAA CACCATTGTCCTTCCTACGC 57 359
Cytochrome P450s
    CYP325AA1 AAEL004012 1.105 AACGATGCGGCTCTACCCA GAACTTCAAATCCTTTCGAGTCAAT 57 346
    CYP6CB2 AAEL002872 1.1337 ATTGCCCATTCGTGCTCTG TCTCCTCCGTGTTCCCTTTT 57 282
    CYP6AK1 AAEL004941 1.136 TCTCGAAAGACAATGCAGACAAC TCCAAATCGGCGTACAATCC 61 229
    CYP325X1 AAEL005695 1.17 TGATACCGAGGAGGAATACAATAAAC GGGCCACATAAGGCACAACC 61 335
    CYP325Q1 AAEL006044 1.187 GAATGATGAAACCGATGACG GCACTCCTCCGCAAAGC 61 386
    CYP307B1v2 AAEL006875 1.224 CTCAACAACTACGACCTCAGCAT GAGCCCACCGGAACGAA 61 248
    CYP4H29 AAEL007830 1.285 TTCATCCATCCGTTCCAATCA TCTATCGTGGCACAATCTTCACA 61 393
    CYP49A1 AAEL008638 1.338 CAGAACCCAGACAAGCAGGAA CCGTAACCGAAGGGCAAACTA 61 2000
    CYP307A1 AAEL009762 1.427 GGCGAAGACGAACCAGAGCG GGCGATGAGGAGTACCGAAGGA 61 308
    CYP9M9 AAEL001807 1.43 CGGCACCAAGGTAACGG CATCGGCACATCGGTCTTT 61 280
    CYP12F6 AAEL002005 1.47 ATGATTCTGGCAGGTGTC GGTTTCCTACTATGGGTGG 52 220
    CYP314A1 AAEL010946 1.524 TCCGATACAATCACCAACAATG AATGGAAGCACCAAAGACGA 57 305
    CYP325S1 AAEL000326 1.6 TGAATTTCTACGGAATATGGAAGG AACGGACGACTGCTGTTGG 57 279
    CYP315A1 AAEL011850 1.622 TTTGAAAGGATAGTGCCAGAA GGAGCAATAGGGAACAGACG 57 323
    CYP6AA5 AAEL012492 1.702 GCCCGTCATTCGCACAGT TTCAACATCCAGCCAAAGTCC 61 210
    CYP4H33 AAEL013798 1.923 CCTGATTCGCACTACCTGTG AACTCATCCTTTCCTGCCTTA 61 395
    CYP4J17 AAEL014019 1.985 CCAGGAGGAATGCGACAAACT ACCTAACAGGCGGTAGGGAAAT 57 250
Glutathione-S-transferases
    GSTt4 AAEL004229 1.111 CCAACGGCGTCACCATTCTC GCTGATTCAGGTTCTGCTCCATCT 61 246
    GSTe1 AAEL007954 1.291 TTTCCTTTCCCTAAGTTCCGTCTC CAGCACAAACCCATCATCGTC 49 179
    GSTe3 AAEL007947 1.291 CTGGTACAGAAATACGGCAAAGA GAACAGGGCATTCAGAGTGGA 57 297
    GSTx2 AAEL010500 1.481 CGAGGCATCATCAACCAACGG TCGGCAGATCACTCAGGTCAACA 63 268
    GSTi1 AAEL011752 1.608 GCCGCTTGGGAAGTAAGTTTG TGATGGGATGAATTGGGTGCT 61 255

Ta, annealing temperature; Prod. size, product size (bp).

a

Genes that were placed on the linkage map in this study.