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. Author manuscript; available in PMC: 2009 Sep 1.
Published in final edited form as: Mol Cancer Ther. 2008 Sep 2;7(9):3071–3080. doi: 10.1158/1535-7163.MCT-08-0402

Table 1.

Top 3-gene and 4-gene combinations identified based microarray data analyses

Combination Gene Symbols Tumor Coverage by Cluster Analysis
Grouping (See Figure 1C)
3-Gene Combinations 1 TM4SF4 PCDHB10 FCGR1A Group II: TPan21, TPan22, TPan24 and
TPan25
2 IL1RAP PCDHB10 SLCO1B3 Group II: TPan21, TPan22, TPan24 and
TPan25
3 PTPRR IL1RAP PCDHB10 Group II: TPan22 and TPan25
Group III: TPan26.
4 IL1RAP PCDHB10 SLC2A13 Group II: TPan22 and TPan25.
Group III: TPan26.
5 TM4SF4 PCDHB10 SLC2A13 Group II: TPan22 and TPan25
Group III: TPan26
6 PCDHB10 FCGR1A SLCO1B3 Group II: TPan21, TPan22, TPan24 and
TPan25
7 CLEC4A PCDHB10 SLCO1B3 Group II: TPan21, TPan22, TPan24 and
TPan25
4-Gene Combinations 1 TM4SF4 FCGR1A ASGR1 IL1RAP Group II: TPan19, TPan21, TPan22,
TPan24, TPan25 and TPan27.
2 TM4SF4 PCDHB10 PCDHB9 IL1RAP Group II: TPan21, TPan22, TPan24 and
TPan25
Group III: TPan26.
3 TNFSF4 TM4SF4 MGC34923 TGFBR1 Group II: TPan15, TPan19, TPan22,
TPan25 and TPan27.
4 PCDHB8 HLA-DQA1 PCDHB10 SLCO1B3 Group II: TPan18, TPan21, TPan22,
TPan24 and TPan25.
5 PTPRR PTPRC SLCO1B3 ASGR1 Group I: TPan10.
Group II: TPan20, TPan22, TPan23,
TPan25 and TPan28.
6 PTPRR MS4A4A SLCO1B3 ASGR1 Group I: TPan10.
Group II: TPan20, TPan22, TPan23,
TPan25 and TPan28.
7 PTPRR CEACAM6 MS4A4A SLCO1B3 Group I: TPan10.
Group II: TPan20, TPan22, TPan23,
TPan25 and TPan28.