Table 1. Effect of random amino acid substitutions on the average loss and gain of CTL epitopes per MHC allele in the HIV-1 HXB2 reference sequence.
loss of epitopes | gain of epitopes | |
Mutations affecting epitope count | 3.8% | 4.3% |
due to processing escapes | 38% | 40% |
due to MHC-binding escapes | 80% | 81% |