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. 2008 Aug 22;74(20):6405–6416. doi: 10.1128/AEM.00197-08

TABLE 1.

Features of the Polaromonas sp. strain JS666 genomea

Feature Value
Total size (bases) 5,898,676
    Chromosome 5,200,264
    Plasmid 1 (pPol360) 360,405
    Plasmid 2 (pPol338) 338,007
Gene density (no. of genes per kb) 0.944
Avg gene length (bases) 931
G+C% 61.97
No. of protein-coding genes 5,569
No. of genes with function prediction 4,099
No. of conserved hypothetical genes 1,388
No. of hypothetical genes (ORFans) 82
No. of pseudogenes 116
Coding region (%) 99.2
rRNA 1 operon, arranged 16S-tRNAIle-tRNAAla-23S-5S
tRNA 44
tmRNA 1
Putative mobile genetic elements (no.)
    Plasmids 2
    Transposases 55
    Phage 1
    Genomic islands 8
    Retrons 6
    Inteins 2
Xenobiotic/hydrocarbon metabolism
Total monooxygenases 16
Total no. of P450s 4
Total no. of dioxygenases 43
Total no. of glutathione S-transferases 21
Total no. of hydrolases 111
Total no. of hydratases 27
Total no. of dehalogenases 9
a

Derived, in part, from the DOE-JGI IMG server (http://img.jgi.doe.gov).