TABLE 2.

Coverage of 10,762 HapMap SNPs (MAF > 0.05)^* within −10 kb/+5 kb of 222 candidate genes

	SNPs −10 kb/+5 kb of gene
	Number of SNPs analyzed†	Number captured‡	Percent captured‡
SNPs genotyped on GWA panel only	2,150	8,507	79.04
All 3,531 genotyped SNPs	3,531	10,299	95.74
Genotyped and imputed SNPs from GWA panel only	10,596	10,647	98.93
All 3,531 genotyped and 7,498 imputed SNPs	11,029	10,752§	99.91

^*MAF > 0.05 in HapMap CEU.

^†Genotyped SNPs are located within −50 kb/+50 kb of a gene but may not be within −10 kb/+5 kb of a gene. Imputed SNPs are all located within −10 kb/+5 kb of a gene.

^‡HapMap SNPs genotyped, imputed, or tagged (r²> 0.8) by a genotyped SNP.

^§A total of 10,752 includes 3,187 genotyped SNPs, 7,498 imputed SNPs, and 67 SNPs tagged (r²> 0.8) by a genotyped SNP.