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. 2008 Apr;14(4):557–565. doi: 10.3201/eid1404.071083

Table 1. Primers sequences and amplification parameters used in the present study.

Locus Primer 5′ labeling Sequence (5′ → 3′)* Annealing temperature, °C
14αDM† DMC1 >TGGGTGGTCAACATACTTC 50
DMC2‡ <CATCTRTGTCTACCACCACC
Actin ACTa >AAGGTATTATGGTTGGTATGG 55
ACTb <TCGAAATCTAAAGCAACGTAA
URA3 URAF HEX§ >ATTGGATAGTCCCTCTAAACTCACTACTA 55
URAr <AGCATTAGTTATATCACTCCACGATGAA
URAF2 >TGCCGATATTGGAAATACAGTTA 50
URAr2 <AATCAACTATTCAAGTTGACCG
CTU2 <GTTGGAACATCAATTGATGCACATAAAT 55
Unknown CT14a 6FAM¶ >GTAAATCTTGTATACCGTGGA 55
CT14b <TAGCCCATTTTCTAGTTTTGC
FCY1 CTCDf >ATCATTAGTTCAGATGGTAAAGTCTTG 58
CTCDr <CCTTTTTAGTAACATGTCTATTCTCCA
FCY2 CTCP1f >TGCCCATAAATTAAATGCAGAA 58
CTCP1r <GGAAGCAACAAACCCAAAAA
FCY2 CTCP2f >TGCTGCCGATTATGTTGTTT 58
CTCP2r <GTGAAAACGAGCCAATCCAT
FUR1 FUR1f >TCATCAAAACCATGTCTGCTG 58
FUR1r <AAGTGTATGTAGTGATAATTGCTATGC

*>, Sense primer; <, antisense primer.
†14 α demethylase.
‡R = G or A.
§4, 7, 2′,4′, 5′,7′-hexachloro-6-carboxyfluorescein.
¶6-carboxyfluorescein.