Table 1. Primers sequences and amplification parameters used in the present study.
Locus | Primer | 5′ labeling | Sequence (5′ → 3′)* | Annealing temperature, °C | |
---|---|---|---|---|---|
14αDM† | DMC1 | >TGGGTGGTCAACATACTTC | 50 | ||
DMC2‡ | <CATCTRTGTCTACCACCACC | ||||
Actin | ACTa | >AAGGTATTATGGTTGGTATGG | 55 | ||
ACTb | <TCGAAATCTAAAGCAACGTAA | ||||
URA3 | URAF | HEX§ | >ATTGGATAGTCCCTCTAAACTCACTACTA | 55 | |
URAr | <AGCATTAGTTATATCACTCCACGATGAA | ||||
URAF2 | >TGCCGATATTGGAAATACAGTTA | 50 | |||
URAr2 | <AATCAACTATTCAAGTTGACCG | ||||
CTU2 | <GTTGGAACATCAATTGATGCACATAAAT | 55 | |||
Unknown | CT14a | 6FAM¶ | >GTAAATCTTGTATACCGTGGA | 55 | |
CT14b | <TAGCCCATTTTCTAGTTTTGC | ||||
FCY1 | CTCDf | >ATCATTAGTTCAGATGGTAAAGTCTTG | 58 | ||
CTCDr | <CCTTTTTAGTAACATGTCTATTCTCCA | ||||
FCY2 | CTCP1f | >TGCCCATAAATTAAATGCAGAA | 58 | ||
CTCP1r | <GGAAGCAACAAACCCAAAAA | ||||
FCY2 | CTCP2f | >TGCTGCCGATTATGTTGTTT | 58 | ||
CTCP2r | <GTGAAAACGAGCCAATCCAT | ||||
FUR1 | FUR1f | >TCATCAAAACCATGTCTGCTG | 58 | ||
FUR1r | <AAGTGTATGTAGTGATAATTGCTATGC |
*>, Sense primer; <, antisense primer. †14 α demethylase. ‡R = G or A. §4, 7, 2′,4′, 5′,7′-hexachloro-6-carboxyfluorescein. ¶6-carboxyfluorescein.