. Author manuscript; available in PMC: 2008 Oct 23.

Published in final edited form as: Biochemistry. 2007 Jan 25;46(7):1821–1828. doi: 10.1021/bi6024403

Table 3.

Results of MATRAS search for Proteins Similar to PhzM

PDB entry	Protein	MATRAS R_dis similarity score^a	rmsd (Å) for aligned Cα	no. of aligned residues	% sequence identity
1KYW	CaOMT, alfalfa	58.8	2.9	313	24
1FP2	IOMT, alfalfa	55.6	3.7	319	25
1FP1	ChOMT, alfalfa	55.7	2.7	308	21
1TW3	DnrK, Streptomyces peucetius	57.6	4.1	321	27
1ZG3	Isoflavonone MT, alfalfa	52.8	3.7	235	27
1X19	BchU, Chlorobium tepidum	50.8	3.4	315	17
1QZZ	Rdmb, Streptomyces purpurascens	44.8	6.7	321	24
1IM8^b	YecO, Heamophilus influenzae	28.2	3.3	194	15

See http://biunit.naist.jp/matras/index.html for a detailed description of scoring.

Included to illustrate the drop off in similarity beyond the closer homologs.