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. 2008 Oct 3;8:284. doi: 10.1186/1471-2407-8-284

Table 1.

Primer sequences and optimized annealing temperatures for each pair of primers

Primers Sequence CpG sites Location Length (bp) Annealing temp. (°C)
P1 5' TATGTAGGATCGAAGTTTTC 3' 2 -405 ~ -64 341 60–62
P2 5' TAAAAACGCCTCCGCCG 3' 3
P3 5' GGGTATAGTGCGGGAGC 3' 2 -235 ~ +22 257 65–67
P4 5' CAACCGCACGAAAAACGC 3' 3
P5 5' GAGGCGTTAGGCGGTTC 3' 3 -180 ~ -26 155 64.5
P6 5' AACTAACGACCGACGAAC 3' 3
U1 5' GAGGTGTTAGGTGGTTTGTT 3' 3 -180 ~ +71 252 62
U2 5' CCCACCAAAATCACAACAA 3' 3