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. 2008 Oct 31;3(10):e3600. doi: 10.1371/journal.pone.0003600

Table 3. Genotype Distribution by TT Status Based on Univariate Analysis.

Gene category Gene (SNP) Genotype TT (n = 135) Controls (n = 232) p-value
Proinflammatory cytokine genes TNFA (−308 G>A) GG 91 (67%) 105 (45%) <0.001
GA 41 (30%) 105 (45%)
AA 3 (3%) 22 (10%)
LTA (252 G>A) GG 51 (38%) 55 (24%) <0.001
GA 70 (52%) 116 (50%)
AA 14 (10%) 61 (26%)
IL1A (−889 C>T) CC 5 (4%) 11 (5%) 0.002
CT 55 (41%) 127 (55%)
TT 75 (56%) 94 (40%)
IL1B (F105F) CC 116 (86%) 160 (69%) <0.001
CT 18 (13%) 72 (31%)
TT 1 (1%) 0
IL6 (−174 C>G) CC 123 (91%) 227 (98%) 0.02
CG 11 (8%) 5 (2%)
GG 1 (1%) 0
Adhesion molecule genes VCAM1 (−1594 T>C) TT 89 (66%) 118 (51%) 0.001
TC 35 (26%) 104 (45%)
CC 11 (8%) 10 (4%)
Th1/Th2/Th3 cytokines and related genes IL4 (−589 C>T) CC 32 (24%) 25 (11%) 0.004
CT 64 (47%) 125 (54%)
TT 39 (29%) 82 (35%)
IL4R (Q576R) AA 71 (53%) 79 (43%) <0.001
AG 53 (39%) 141 (51%)
GG 11 (8%) 12 (6%)
IL4R (I50V) AA 37 (28%) 67 (29%) 0.017
AG 60 (44%) 128 (55%)
GG 38 (28%) 37 (16%)
IL9 (T113M) CC 126 (93%) 158 (68%) <0.001
CT 9 (7%) 73 (32%)
TT 0 1 (0.4%)
Chemokines and related genes CCR3* (P39L) CC 133 (98%) 202 (88%) 0.001
CT 1 (0.1%) 28 (12%)
TT 1 (0.1%) 0
Miscellaneous ADRB2 (Q27E) CC 99 (74%) 134 (58%) 0.011
CG 33 (24%) 90 (39%)
GG 3 (2%) 8 (3%)
ADRB2* (T164I CC 312 (87.1%) 177 (100) 0.001
CT 45 (12.6%) 0
TT 1 (0.3%) 0
CTLA4 (−318 C>T) CC 98 (73%) 134 (58%) 0.016
CT 34 (25%) 92 (40%)
TT 3 (2%) 6 (2%)
NOS2A (D346D) CC 101 (75%) 137 (59%) 0.007
CT 34 (25%) 93 (40%)
TT 0 2 (1%)
NOS3 (E298D) GG 94 (70%) 192 (83%) 0.014
GT 39 (29%) 38 (16%)
TT 2 (1%) 2 (1%)
*

Total number of controls were 230 for ADRB2(T164I), CCR3(P39L), total number of TT cases were same as all (n = 135).