GABAA receptor protein complexes were analyzed using sucrose
density gradients. Whole cell lysates were extracted using high detergent
RIPA buffer and subjected to 5–20% linear sucrose density gradients.
Following centrifugation to separate protein complexes of different sizes,
gradients were fractionated into 23 fractions from the top to bottom. 14
fractions were selected to analyze the sedimentation coefficients using
Western blot and compared with proteins with known sedimentation coefficients
(bovine serum albumin, 4.3 S; aldolase, 7.4 S). The chosen fractions are
indicated beneath the Western blots. A1, representative
Western blots of α1 subunit staining in single subunit (α1),
α1β2, α1(D420A)β2, and α1β2(D450A) expression
conditions are presented. A2, the distribution of protein complexes
containing α1(D420A) subunits with α1(D420A)β2 subunit
coexpression was plotted (bold line). The distributions of protein
complexes containing α1 subunits with single subunit expression
(dotted line with ▴) or α1β2 subunit coexpression
(solid line with ▴) are included for comparison. A3,
as in A2 except for protein complexes containing α1 subunits
with α1β2(D450A) subunit coexpression. B1, B2, and
B3, as in A1, A2, and A3, except that staining was
for β2FLAG subunits using anti-β2 antibodies following
immunoprecipitation with anti-FLAG M2 beads (to eliminate nonspecific
staining; see Fig. 9).