TABLE 1.
Characterization of FPV and CPV isolates from virus samples analyzed from natural infectionsa
| Virus | GenBank accession no. | Host | Yr of collection | Sample tissue | No. of clones
|
Rearranged genome region (nt) (VP2)
|
||
|---|---|---|---|---|---|---|---|---|
| NS1 | VP2 | Deleted | Inserted | |||||
| FPV-4.us.64 | EU659112 | Cat | 1964 | Spleen | 7 | 5 | ||
| FPV-3.us.67 | EU659111 | Cat | 1967 | Kidney | 39 | 38 | 1981-3010 | 1549-1980 |
| 2525-2889 | ||||||||
| 2710-3090 | ||||||||
| 2689-3336 | ||||||||
| 2843-3311 | ||||||||
| CPV-5.us.79 | EU659116 | Dog | 1979 | Spleen | 4 | 11 | ||
| CPV-6.us.80 | EU659117 | Dog | 1980 | Feces | 7 | 8 | ||
| CPV-13.us.81 | EU659118 | Dog | 1981 | Feces | 37 | 21 | 2383-3587 | 3702-3990 |
| FPV-8.us.89ab | EU659113 | Mountain lion | 1989 | Tissue | 7 | 7 | ||
| FPV-8.us.89bb | EU659114 | |||||||
| CPV-411.us.98ab | EU659120 | Dog | 1998 | Feces | 8 | 17 | ||
| CPV-411.us.98bb | EU659121 | |||||||
| CPV-410.us.100 | EU659119 | Dog | 2000 | Feces | 41 | 27 | ||
| FPV-kai.us.106 | EU659115 | Cat | 2006 | Small intestine | 40 | 40 | 3153-3420 | 2764-3154 |
a
The host species, year of isolation, and tissue type are indicated, and the numbers of clones analyzed for each gene fragment are shown. GenBank accession numbers for the respective consensus sequences are provided, and rearranged genomes are described, where applicable.
b
Two distinct virus sequences were isolated, referred to as sequences “a” and “b.”