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. Author manuscript; available in PMC: 2009 Aug 29.
Published in final edited form as: J Mol Biol. 2008 Jun 7;381(2):487–507. doi: 10.1016/j.jmb.2008.06.002

Table 3.

Overview of common interfaces.

#Family #CFGs #Entry In PDB (%)** In PQS (%) In PISA (%) In ASU (%)
Single-domain Structures 1377 8816 19842 - - - -
≥2 CFGs/Family 1125 8564 19446 - - - -
≥2 CFGs/Cluster 868 6292 15264 - - - -
N/N (N ≥ 4) 176 1372 3139 90 95 97 58
1>M/N > 0.7 (N ≥ 4) 74 676 1781 88 91 93 61
N/N (N = 2, 3) 266 618 1049 70 76 80 52
M ≥ 4 (M/N ≥ 0.5)* 248 2136 5200 89 93 95 59
*

From the analysis of Ponstingl/Bahadur benchmark set and NMR structures, M ≥ 4 and M/N ≥ 0.5 is most likely to be biological interest.

**

% in PDB, PQS, PISA and ASU are based on clusters, may have duplicate entries. NMR entries are excluded.