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. Author manuscript; available in PMC: 2009 Aug 29.
Published in final edited form as: J Mol Biol. 2008 Jun 7;381(2):487–507. doi: 10.1016/j.jmb.2008.06.002

Table 4.

Biological units of benchmark entries in public databases

PDB PQS PISA
Benchmark monomers
(132)		 88 monomers
41 dimers
3 larger oligomers		 60 monomers
55 dimers
17 larger oligomers		 87 monomers
36 dimers
9 larger oligomers
Benchmark dimers (84) 3 monomers
78 dimers
3 larger oligomers		 1 monomers
76 dimers
7 larger oligomers		 1 monomers
80 dimers
3 larger oligomers
Benchmark oligomers
(size>2) (42)		 1 monomers
1 dimers
40 larger oligomers		 1 monomers
0 dimers
41 larger oligomers		 1 monomers
1 dimers
40 larger oligomers