Table 1.
Summary of overlapping literature-curated genetic interactions in S. pombe and S. cerevisiae
| Genetic interaction type | Interaction source |
Overlapping interactions |
|||
|---|---|---|---|---|---|
| Detectable S. cerevisiae | Detectable S. pombe | Observed no. (%) | Average no. expected ± SD (%) | P | |
| Synthetic lethal + synthetic sick | 10,737 | 273 | 62 (23) | 1.3 ± 1.3 (0.5) | <0.0001 |
| Synthetic lethal | 7,249 | 185 | 33 (18) | 0.7 ± 0.9 (0.4) | <0.0001 |
| Synthetic sick | 4,152 | 61 | 10 (16) | 0.2 ± 0.4 (0.3) | <0.0001 |
| Phenotypic enhancement | 1,347 | 170 | 18 (11) | 0.4 ± 0.6 (0.2) | <0.0001 |
| Phenotypic suppression | 559 | 123 | 9 (7) | 0.1 ± 0.4 (0.1) | <0.0001 |
| All interactions | 12,643 | 566 | 89 (16) | 3.5 ± 2.3 (0.9) | <0.0001 |
Only detectable genetic interactions involving two genes with an ortholog in both species are considered; thus, the S. cerevisiae dataset shown here is smaller than the full ScBioGRID set, and the S. pombe dataset is smaller than the full SpGI-Overlap dataset (see Table S1). The percent observed overlapping values are always calculated with respect to the number of detectable S. pombe interactions.