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. Author manuscript; available in PMC: 2009 Sep 24.
Published in final edited form as: Mol Cell Endocrinol. 2008 May 21;292(1-2):79–86. doi: 10.1016/j.mce.2008.05.007

Table 2. Fine mapping with CLIPS-constrained peptides. Light gray boxes indicate charged residues. Values are corrected for background.

Nine single positional changes that eliminated RING-binding. The complex molecular architecture of the discontinuous binding site was maintained via fixation of linear peptides. Thus changes in binding are due to changes in individual amino acids not changes in the molecular scaffold. Candidates on this list were selected from fine mapping of CLIPS-constrained RING peptides.

Consensus sequence Value
P V I T H C ACVFAKPAIC + AIQNEQP H A K C P L CR
Changes that eliminated binding
M + 3
R + 2
D + 1
T + 0
+ Q −4
S + −16
+ P −23
K + −46
P + −61