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. 2008 Oct 7;8:274. doi: 10.1186/1471-2148-8-274

Table 4.

Test for a recent change in allelic frequency based on the distribution of segregating sites between allelic classes.

Sample Allelic class Class Counta Sequenced Haplotypesb Observed Segregating sitesc
An. arabiensis (TED) S & R 11 s | 33 r 11 s | 24 r 12 | 12#
An. gambiae 'Mbita' (TED) S & R 32 s | 13 r 27 s | 12 r 10 | 3ns
An. gambiae 'Cameroon' (TED) S & R conversion S & R 9 s | 15 sr 9 s | 15 sr 8 | 0 *
An. arabiensis (all) S & R 11 s | 33 r 7 s | 20 r 22 | 23*
An. gambiae 'Mbita' (all) S & R 32 s | 13 r 19 s | 10 r 35 | 11ns

a The observed frequency of the TEP1s and TEP1r classes; b the number of haplotypes sequenced from each allelic class, c the total number of synonymous and non-synonymous segregating sites observed in that allelic class. Significance was assessed using simulations under a neutral model in which the frequency of each allelic class is constant, and proportional to the observed frequency (See main text, and Stahl et al 1999)

ns p > 0.05; # p < 0.1; * p < 0.05,