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Alignment accuracies
| Sets | Scores | SPEM | CSAm | CSAb | Reference |
|---|---|---|---|---|---|
| BAliBase | SPS | 90.91 | 91.07 | 92.37 | 100.0 |
| Reference set 1 | Nmatches | 111,012 | 111,222 | 111,750 | 117,558 |
| HOMSTRAD | SPS | 86.40 | 86.85 | 88.17 | 100.0 |
| (366) | Nmatches | 1,029,191 | 1,032,783 | 1,040,771 | 1,163,915 |
SPS is the average sum-of-pair score (%). The total number of correctly aligned matches is also shown. CSAm indicates the lowest-energy alignment from MSACSA, and CSAb indicates the best alignment in the bank.
