C/EBPβ mRNA from βwt and βd/s cell lines. A,
total RNA was isolated with respect to time after removal of doxycycline from
the culture medium and exposure of the cells to the differentiation protocol.
Accumulation of total C/EBPβ mRNA was determined by real-time PCR
analysis as described under “Experimental Procedures.” The
experiment was performed three times with identical results. B,
cytosolic accumulation of C/EBPβ mRNA in βwt (Bw/t) and
βd/s (Bd/s) cell lines is shown. The cytosolic fraction
(cyto) of the cells was isolated using the Pierce NE-PER™ kit
as we have described previously
(29). Cytosolic RNA was
isolated using the TRIZol™ reagent. Accumulation of C/EBPβ mRNA was
determined by real-time PCR analysis as described under “Experimental
Procedures.” The experiment was performed three times with similar
results. Data are plotted as the mean ± S.D. C, the levels of
βwt and βd/s mRNAs in the cytosol at the 48-h time point (five
independent determinations) are shown. Normalization was to β-laminin
mRNA, the expression of which does not change over the time course of the
experiment, followed by correction for endogenous expression as discussed
under “Experimental Procedures.” βwt content was defined as
100%, and βd/s is expressed relative to that value.