Table II.
List of selected genes differentially expressed in gapc-1 null mutants in comparison to wild-type plants
The expression ratio relative to the control is indicated. The full list of expressed genes can be downloaded from Gene Expression Omnibus (accession no. GSE3540).
| Functiona | At Locus | Relative Fold (Arithmetic) | Localization |
|---|---|---|---|
| NAD-dependent glyceraldehyde-3-P dehydrogenase (GAPC-1) | At3g04120 | 0.05 | Cytosol |
| NAD-dependent glyceraldehyde-3-P dehydrogenase (GAPC-2) | At1g13440 | 0.29 | Cytosol |
| NADP-dependent glyceraldehyde-3-P dehydrogenase (NP-GAPDH) | At2g24270 | 0.06 | Cytosol |
| Phosphofructokinase | At4g26270 | 0.19 | Cytosol |
| At5g61580 | 0.30 | Cytosol | |
| Pyruvate kinase | At3g25960 | 0.32 | Cytosol |
| At3g52990 | 0.32 | Cytosol | |
| Triose-P isomerase | At3g55440 | 0.14 | Cytosol |
| Malate dehydrogenase (NAD-dependent) | At3g53910 | 3.0 | Glycosomal-mitochondria |
| Malate dehydrogenase (NAD-dependent) | At5g56720 | 2.4 | Cytosol |
| Phosphoenolpyruvate carboxylase | At3g14940 | 0.25 | Unknown |
| At2g42600 | 0.5 | Unknown | |
| Glc-6-P dehydrogenase | At5g13110 | 0.7 | Chloroplast |
| At1g24280 | 0.6 | Chloroplast | |
| NAD-malic enzyme | At2g13560 | 0.7 | Mitochondria |
| Citrate synthase | At3g60100 | 0.4 | Mitochondria |
| Succinate dehydrogenase-Fe-S subunit | At3g27380 | 0.2 | Mitochondria |
| Aconitase | At2g05710 | 0.4 | Mitochondria |
| At4g26970 | 0.3 | Mitochondria | |
| Pyruvate decarboxylase | At5g54960 | 0.22 | Cytosol |
| Rubisco small subunit | At1g67090 | 0.28 | Plastid |
| Rubisco large subunit | At1g14030 | 3.1 | Plastid |
| At4g20130 | 2.9 | Plastid | |
| Rubisco activase | At2g39730 | 0.16 | Plastid |
| Peroxiredoxin thioredoxin-dependent peroxidase 2 (TPX2) | At1g65970 | 5.8 | Mitochondria-peroxisome cytosol |
| Peroxidase (PER62) | At5g39580 | 5.2 | Endomembrane |
| PER41 | At5g05340 | 3.2 | Endomembrane |
| PER52 | At4g17690 | 6.5 | Endomembrane |
| PER9 | At1g44970 | 3.3 | Endomembrane |
| PER2 | At1g05250 | 8.2 | Endomembrane |
| PER31 | At3g28200 | 0.39 | Extracellular |
| Catalase 1 | At1g20630 | 0.71 | Mitochondria-peroxisome |
| Catalase 2 | At4g35090 | 0.5 | Mitochondria-peroxisome |
| Catalase 3 | At1g20620 | 0.37 | Mitochondria-peroxisome |
| Alternative oxidase 2 | At5g64210 | 2.6 | Mitochondria |
| Peroxiredoxin | At3g06050 | 0.95 | Mitochondria |
| Superoxide dismutase [Cu-Zn] | At5g18100 | 4.0 | Peroxisome |
| Superoxide dismutase B [Fe] | At4g25100 | 0.44 | Plastid |
| Superoxide dismutase A [Mn] | At3g10920 | 0.43 | Mitochondria |
| Glutathione S-transferase 6 | At2g47730 | 0.42 | Plastid |
a
Results of BLASTN query of Arabidopsis genome sequence.